Arachis hypogaea (peanut): 112765195
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Entry
112765195 CDS
T07294
Name
(RefSeq) uncharacterized protein isoform X1
KO
K06100
symplekin
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112765195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahf03021
]
112765195
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112765195
Transcription machinery [BR:
ahf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112765195
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
112765195
U7-dependent histone pre-mRNA processing factors
112765195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
112765195
NCBI-ProteinID:
XP_025666861
LinkDB
All DBs
Position
17:complement(131454644..131472994)
Genome browser
AA seq
1329 aa
AA seq
DB search
MASSSRDQALSLFAAANNHGDVNVKLSSLTQAKDLLLSLDPSLSADLFPFFLELQSSPES
LVRKLLIQLIEEIGFKAVDHSPALVSILLTFLRDADPIIVKQSIVSGTNIFCNVFVEMIV
QFQQYGKVERWLEGVWMWMLKFKDAVFGIALEPGSAGIKLLGLKFLEIFVLLFTPDNNSP
EKSTGEGSRQAANISWLVGGHPLLDPVALKSEANRTIGILLNLLQPGASLPGCLTITVIN
CLSAIARKRPQHYDTIFSALLDFNPNFQTAKRYHIASVQYSLRTAFLGFLRCTYSPILES
RERLIKTLRAMNAADAADQVIRQVDKIIKNGDRSTRDARVIKDDQSSIQSHVSGELSRKR
AIPLDNEHLANGHEAISKRIRSGPDPHLTLPVQVNDFGQDLNSVNGVSLNATALDGELTA
VEQMIALIGALLAEGERGAESLEILVSKIHPDLLADIVITNMKHLPKTPPPLARIGNSPV
PQQVGSQFSQSKVLSPSAPVSSIQSLAVTDQAPFPSTTITATSSSLSDINNLPADSKRDP
RRDPRRLDPRRIAATLGGAAGSVGDDIVATKLELDDPVSLIKPSSPPVASAEENNQSEAT
INLKNEDIISEGPSLSGPDRLTPKTEVLERPGDTQHIAEAIASLDSSVIPSDATDEDRST
VKLLEDTEANETDSLDFDQFSPDVQVASTSEDTCLELPQLPPYVDLTYEQETKVKHLAIR
HIIESYRHLDGTGCQQFCMPLLARLVAQIDDDNEFIVMLQNQIVEDHWQKGHELVLYVLY
HLHCLTVLDSVENSSSSSVLYEKFLLGVAKSLLESFPASDKSFSRLLGEVPLLPESALNI
LSDLCCSDVVDHNGKIIRDIERVTQGLGAIWSLILGRPQNRQACLGIALKCAVHPQDEIR
AKAIRLVTNKLYQLSYIAEDVEKFATDTLLSAVDHDVSQSGPSEQRPEVEVACQEISGTS
QVSESTLSEHDSDRTTKPMAQSLPSISFSEAQRLISLFFALCTKKPSLLQIVFDVYGRAP
RMVKQAFHRHIPILLRALGQSYTELLHIISDPPQGSENLLTLVLQILTQDSTPSLELIST
VKRLYETKFKDVSILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPAL
TPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLF
MRTVIQAIDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPP
PQLESALNRHANLRGPLASYANQPAVKSTLPRATLEVLGLASESHVQQHLPTSLHPSDTN
SSVQGATLT
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcctccagagaccaagccctctctctcttcgccgccgccaacaaccacggc
gacgtcaacgtcaagctctcatccctcacccaagccaaggacctccttctctccctcgac
ccttctctctccgctgacctcttccctttcttcctcgagcttcagtcctctcccgaatcc
ctcgttcgcaaattgctcatacagttaattgaggagattggttttaaagcagtcgatcat
tctcctgcacttgtttctatactattaacatttttgcgagatgctgatccgataattgta
aagcaatctattgttagtggcacgaacatcttctgtaatgtttttgtggagatgattgtg
cagtttcaacaatatggtaaagtagagaggtggttagaaggggtttggatgtggatgctt
aagttcaaggatgctgtttttgggattgctcttgagcctggttctgccggaataaagttg
ctgggactgaaattcttggaaatattcgtcttgctttttactcctgacaacaatagtcct
gagaaatcaactggagaaggatctaggcaagctgctaatatatcatggttggttggtggt
caccctcttcttgatccggtggctctcaagtcggaggcaaacaggaccattggcattcta
ttaaatttattgcagcctggtgcaagtctccctggttgtttaacaattactgttataaat
tgtttatcagctattgcaaggaaacggccgcaacactacgatacaattttttctgcattg
ctcgattttaatccaaattttcaaacagcgaaaagatatcatattgccagtgttcagtac
tctttaagaactgcttttttggggtttcttaggtgcacttattcacctatactagagtct
cgagaaagattgataaagaccctgcgggccatgaatgcagcggatgctgccgatcaggtc
atcagacaagttgacaaaattattaaaaacggtgatcgttctacacgtgatgctcgggtt
atcaaggatgatcaatcatcaattcagtcacatgtttcaggggaattatctagaaaaaga
gctattcctttggataatgaacatctggccaatggtcacgaggcaatctctaagcggatt
cgatctggtcctgaccctcacttaactttaccagttcaagtaaatgactttggacaggat
cttaactctgttaatggagtatcacttaatgctactgcactagatggtgaattaactgca
gtggagcaaatgattgctttgattggtgctttgcttgctgaaggagaaagaggtgctgaa
tctcttgaaatccttgtttccaagattcatcctgatctgttggcggatattgtgataaca
aatatgaagcacttgcctaagacacccccaccgctagcaaggattgggaattcgccagta
cctcaacaagttggttcccaattcagtcaatcaaaagttttatcaccatctgctccagta
agttctatccaatcattggctgttactgaccaagcaccattcccttcaactacaatcact
gccactagttcatcactgtctgacatcaataatttgcctgctgattctaaacgcgaccca
cgcagggatccccgtcgcttggatccacggcgtatagctgcaactcttggtggggcagct
gggtctgttggagatgatattgtggcaacaaaattagagttagatgatcctgtatctttg
attaagccttcttcacctcctgttgcctccgctgaagaaaataatcaatctgaggcaaca
atcaatctgaaaaatgaggatatcatttctgaaggtccctcactttctggacctgatcgg
ctaactcccaagacagaggttctggagaggcctggagatacccagcacattgcggaagca
attgcttctttggattcctcagtcattccctctgatgcaactgatgaagatcgtagtaca
gtgaagctgttggaggatactgaagcaaatgagaccgactcattagattttgatcagttt
tctcctgatgtccaagttgcatctacatcagaagatacctgtctagaactaccacagcta
ccaccatatgtggatctaacctatgagcaggaaactaaggtgaagcacctggctattagg
catattatagagtcatacaggcatttggatgggacaggatgtcagcaattttgcatgcca
ctccttgctcggcttgtagctcagattgatgacgataatgagttcattgtgatgttgcaa
aaccaaattgtggaagaccactggcaaaagggtcatgaactagtgctgtatgttttgtac
catctgcactgcctcacagtattggattcagttgaaaactcttcctcttcttctgtcttg
tatgaaaagtttctcttgggagtggccaaatctttgttggaatcttttccggcttcagac
aaatcttttagtaggcttcttggtgaagttccacttttgccagaatctgccttgaatatt
ttgagtgatctctgctgttctgacgttgttgatcataatggaaaaattattcgtgatatc
gaacgtgtaactcaaggtctaggtgctatatggagtttaattttggggcgtccacaaaat
cgccaagcgtgcttgggcatagcattaaagtgtgctgttcacccacaagatgagattcga
gcaaaagctattcggctggtgacaaacaagctctatcagcttagttacattgcagaagat
gttgagaaatttgccactgatactcttctttctgccgtagaccatgatgtttcgcaatct
ggaccctctgaacagagacctgaggtagaggttgcatgtcaggaaataagtggcacatca
caggtctcagagtctaccctttcagaacacgactctgatagaaccactaagccaatggct
caaagtcttccgtctatatcattctctgaagctcaacgcttaatttctttatttttcgct
ttatgtacaaagaaacctagtcttcttcagattgtatttgatgtctatgggcgagcccca
aggatggttaagcaggcttttcatcgccacattcctattcttctgagggcattagggcaa
tcttatactgaattgcttcatattatatctgatccaccacaaggaagtgaaaatcttttg
acactggtactgcaaatattgactcaagattcaacaccatcattggaactgatatctact
gtaaaacgtctatatgaaactaaatttaaggatgtttcaattctggttccactgctgtca
tcactctccaaaaaggaggtgttaccaatattcccccgccttgttgacctaccattggag
aagtttcagagggcacttgctcacatactacagggatcggctcatacaggtccagcatta
acgccggttgaagtgttggtcgcaatccatggaattgttcccgagaaagatggccttgca
cttaagaagataacagatgcttgttcagcatgttttgagcagcgtacagtgttcacacaa
caggttctggcaaaagcattgaaccagatggttgaccaaactccgttgcctctacttttc
atgaggacagttattcaggcaattgacgctttccctgcattggttgattttgttatggag
atactttcaaaacttgtgactaaacaggtgtggcgcatgccaaaactttgggttggtttt
ttaaaatgcgtataccagactcaaccgcgttcttttcatgtattattgcagttgccaccg
ccacaactggaaagtgctcttaacaggcatgctaacctcagaggtccccttgcttcctat
gccaatcaaccagcagtaaaatctacacttcctagagcaactttagaagttctgggtctt
gcaagtgaatctcacgtgcagcaacatttgccaacatcattgcacccatctgacacaaat
tcttcagttcaaggagcaacactgacatga
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