Arachis hypogaea (peanut): 112766298
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Entry
112766298 CDS
T07294
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1
KO
K15172
transcription elongation factor SPT5
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112766298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahf03021
]
112766298
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112766298
Transcription machinery [BR:
ahf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
112766298
RNA polymerase I system
112766298
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
112766298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
KOW6_SPT51-2
KOW4_SPT5
Spt5-NGN
KOW2_Spt5
KOW7_SPT5
KOW
KOW5_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
DUF4438
ProQ_C
Motif
Other DBs
NCBI-GeneID:
112766298
NCBI-ProteinID:
XP_025667991
LinkDB
All DBs
Position
17:complement(123900427..123908278)
Genome browser
AA seq
1028 aa
AA seq
DB search
MSHRGMDDDDEEEYEEDEQVADFDEEAEEEEDDRGRGSGGRKRRRSDFIDDDAEEVDEDE
EEEDDDDDYGGGGGRRRQNRKASASHFFDDIAEVDSDGEEEEEEGEDDFFVDNGNDIPED
NVGRSRLHRPLHEQDEDFEALERHIQERYARRVESFDEEATDVEQQALLPSVRDPKLWMV
KCMIGRERETAVCLMQKYIDKGAELQIRSAIALDHLKNYIYVEADKEAHVREAIKGLRNI
YGVSKITLVPIREMTDVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVK
LIPRIDLQALANKLEGREVVKKKAFVPPPRFLNVDEARELHIRVEHRRDAYGERFDAIGG
MMFKDGFLYKTVSIKSINAQNIKPTLNELEKFRKPGESGDSDVASLSTLFANRKKGHFMK
GDAVIVVKGDLKKLKGWVEKVDEDNVHIRPELKGLPKTLAVNERELCKYFEPGNHVKVVT
GAQEGATGMVVKVEQHVLILLSDTTKEHIRVFADDVVESSEVTTGITKIGDYELRDLVLL
DNMDFGVIIRVESEAFQVLKGTADRPEVALVKLREIKCKIEKKINAQDKHKNTVSVKDVV
RVVEGPCHGKSGPVEHIFRGFLFIYDRHHLEHAGFICARAGSCMVVGGSRSSGDRNGDAY
SRFPGLRTPPRIPQSPRRFSRGGPPIDSGGRHRGGRGHDGLAGATVKVRQGAYKGYRGRV
IEVKGTTVRVELESQMKVVTVDRNHISDNVAVTPQRETRYSIGCETPMHPSRTPLHPYMT
PMRDPGATPIHDGMRTPRRDRAWNPYTPMSPTRDWEDGNPGSWGTSPQSQAGSSPSRLYE
APTPGAGWGSTPGGNYNEAGTPHDSYVNVASPYLPSTPGGQPMTPNSAVYLPSTPGGPPM
TPGTGGLDMMSPVLGGDNEGPWFMPDILVNVHRPGEESVGVIREVLPDGSCKVALGSSGN
GETITALPNEMEAVVPRKSDKIKIMGGALRGSTGKLIGVDGTDGIVKVDDTLEVKILDLV
ILAKLAQP
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacagaggaatggacgacgatgatgaggaggagtacgaggaggacgagcaggta
gccgacttcgatgaggaggcagaggaggaagaggacgatagggggcgcggcagcggcggc
aggaaacgtcggagatctgatttcatcgatgatgatgctgaggaggtggatgaggatgag
gaggaggaggacgatgacgatgattatgggggtggtggcggccgcaggcgccagaatagg
aaagcctctgcttctcatttcttcgatgacatagcggaggtggattcagatggggaagaa
gaagaagaggaaggggaggacgatttctttgttgataatggaaatgatattcctgaggac
aatgtcggtaggagcagacttcataggcctttgcatgagcaagatgaagattttgaagct
ttagaaagacacatccaggaaagatatgcaaggcgtgtggaatcttttgatgaagaggct
acagatgtagaacagcaagctcttttgccatctgttagagatccaaagctgtggatggtg
aaatgcatgattggtcgtgagcgagagacagctgtttgccttatgcaaaagtatatagat
aagggggctgaattgcaaatcaggtcagctattgcccttgatcatcttaaaaactatatt
tatgtggaagcagataaagaggcccacgtgagagaggctattaagggtttaaggaacata
tatggggtgtcaaaaataacactagttccaataagagaaatgacggatgtgctgtcagtt
gaaagcaaagcaattgatcttgccagagatacttgggtcagaatgaagattggcacatat
aaaggggaccttgccaaggtagttgatgttgataatgtgaggcagagggttacggtgaaa
ctgattccaaggatagacttgcaggcgcttgcaaataaactggaaggtagagaagttgtg
aaaaagaaggcgtttgtccctcctcctcgttttttgaatgttgatgaagctagggaactg
catattcgtgtcgagcatagacgtgatgcctatggggaaagatttgatgcaattggagga
atgatgtttaaggatggattcttatacaaaactgtatcaataaaatccattaatgctcaa
aacatcaaacctactttgaatgaacttgaaaaatttcgaaaacctggtgagagtggtgac
agcgatgtagcaagtctgtcaactttgttcgctaacagaaagaaaggccattttatgaaa
ggtgatgctgtaatcgttgtgaagggtgatttgaagaagttgaaggggtgggtggagaaa
gtagatgaagataatgttcatataagaccagaattgaagggtcttcctaaaacccttgct
gtaaatgaaagggaactttgtaaatattttgaacctggaaaccacgttaaggttgttact
ggtgctcaagagggtgctaccggcatggttgtgaaggtggaacagcatgtattgattcta
ttatccgacacaacaaaagaacatatccgtgtgtttgcagatgatgttgtggagagttct
gaagtgaccactggaattacaaaaattggggactatgaacttcgtgatcttgtattgtta
gataatatggactttggtgtaataattcgtgtagaaagcgaggcatttcaggttcttaag
gggactgcagacaggcctgaagttgcacttgttaaattaagagagattaaatgtaagata
gagaagaaaataaatgcgcaggataagcataagaatacagtctcagtaaaggatgttgtg
cgagttgtcgaaggtccttgccatggaaaatctggtcctgtggagcacatatttaggggg
ttcttgttcatctatgatcgccatcatcttgaacatgcaggctttatatgtgctagggct
ggctcgtgtatggtcgttggaggttcacgttcgagtggtgacagaaacggtgatgcctac
tcgagattccctggccttagaactccacctcgtattccccagtccccgagaaggttttca
cgaggagggcctccaattgattctggaggaaggcacaggggtggaagaggacacgatggt
ttggctggtgcaacagtcaaagtacgccagggtgcttataaaggttatcgtggacgtgta
atagaagttaaaggcacaacagttcgggttgaattggagtcccaaatgaaggttgtgacg
gttgatcgcaaccatatatcggataatgtagctgtaaccccacagcgtgaaactcgatat
tcgattggatgtgaaaccccaatgcatccttctcgaactcccctacatccatatatgacc
cctatgagagatcctggagcaactcctatacatgatggaatgaggacaccaaggcgtgac
cgggcatggaatccttataccccaatgagtccgacaagggactgggaagatggaaatcca
ggctcatggggaaccagcccacagtcccaggcaggaagctcaccttcacggctatatgaa
gcccccactcctggtgctggttggggtagcactcctggcggaaactataatgaggctgga
acaccgcatgactcatatgtaaatgttgcgagcccatatttaccatcaacacctggtggg
cagcctatgacgccaaattccgcggtgtatcttcccagtacccctggaggaccacccatg
actccaggaactggtggtctggacatgatgtccccagttttaggtggggacaatgagggg
ccatggtttatgccagacatattagttaatgtacacaggccaggtgaagaatctgttgga
gttataagagaggttcttccggatgggtcttgcaaggtagcgcttggctcaagtggaaat
ggtgaaacgataactgcccttcccaatgaaatggaggccgtggtgccaaggaaatcagac
aaaataaagataatgggtggagcattgagggggtctacaggcaagttgattggtgtagat
ggtactgatggtattgtaaaggtagatgacacattggaagtcaagattttagacctagtt
attttggccaaattagctcaaccatga
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