Arachis hypogaea (peanut): 112766427
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Entry
112766427 CDS
T07294
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112766427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112766427
03012 Translation factors [BR:
ahf03012
]
112766427
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112766427
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112766427
Translation factors [BR:
ahf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112766427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
R3H
DEAD
HA2_C
HA2_N
nSTAND3
ATPase
Ank_2
AAA_22
Ank_5
AAA_19
AAA_14
PhoH
AAA_7
ABC_tran
AAA_23
Rad17
TPR_TTI1_C
DUF6639
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
112766427
NCBI-ProteinID:
XP_025668108
LinkDB
All DBs
Position
17:complement(4677221..4684159)
Genome browser
AA seq
1174 aa
AA seq
DB search
MTKRKEKNKGNPLQRQNPKVEEVTRIRISQILEQFRASKDEVYKFEAGLSNEERALVHQL
AQKMGFKSKSSGYGKERRVAVHKIKKKVETNNGFGNLPYFAFSQEASQVLGNLFAHYPPG
DGSLWEMIGENSDSPEKFKPKKDDIFARPSMSKADIAKKMEALNSRIMTTSNLKQITEDR
SKLPIASFKDTIVSTIESHQVVLISGETGCGKTTQVPQFILDHMWSKGEVCKIVCTQPRR
ISATSVSDRIASERGEAIGESVGYKIRLEGKGGRNSSIVLCTTGVLLRVLVSKGSCSSKT
GPIKDDISGITHIIMDEIHERDRYSDFMLAIIRDMLPSYPRLRLVLMSATIDAARFSQYF
GGCPIINVPGFTYPVKTFYLEDVLSIIKSKDGGNHLEDNTASETPINNCELSEEEKLSID
EAINLAWFNDEWDMLSELVSSEGSLKLFNYQHSLTGLTPLMVFAGKGRVGDMCMLLSLGA
DCHLRSHDGNIALEIAERENQQEAAEILKKHMDNNFSNSIEEKQLLDKYLATVNPELIDE
VLIEQLIRKICGDSEDGGILVFLPGWDDINRTRERLLASSFFKNQSKFMVIALHSMVPSM
EQRKVFKRPPHGCRKIVLSTNIAETAITIDDIVYVIDTGRMKEKSYDPYNNVSTLQSSWV
SKASAKQREGRAGRCQPGICYHLYSKIRAASLPDFQIPEIRRISIEELCLQVKLLDPTCK
IEEYLRKTLDPPVLESIRHAILVLQDIGALTTDEKLTELGEKLGSLPVHPLTSRMLFFAI
LMDCLNPALTVACASDYRDPFTLPMLPEEKKRASAAKAELASLYGGSGDQFAVVAAFECW
SNAKNMGLESRFCSQYFVSSSAMHMLSGMRKQLQKELVRSGFIPEDATSYSMNAHDPGVL
HAVLVAGLYPMVGRFSPNKKGKRAIIETAGGDKVRLHTHSTNFKLSLKKNAEHTLIVYDE
ITRGDMGMSIRNCTVVGPLPLLLLSTEIAVAPAQDNDSGDGSDDDNDDDDDEESEDEDED
EVKPEDAMEVDNKSSGDTEDKIMSSPENMVKVIMDRWLYFGSTAMDVAQLYCLRERLSAA
ILYKVTHPRNSLPPMLGASMHAIACILSCDGCSGLPVTSDGVDTLATMVNTTYLGKPAPG
TRRLGKKQKGQSTEHINSEGSQISGPSRGSIPAS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagagaaaggagaagaacaaaggaaatccacttcagcgtcagaatcccaaggtt
gaggaagttaccaggatccgcatttcacagattctcgaacagtttcgagcttccaaagat
gaagtgtacaaatttgaagctggtttgtcgaatgaagagcgtgctttggtgcatcaatta
gcccagaaaatggggtttaagtctaaaagttctgggtatgggaaagaaaggagggtggct
gttcataaaataaaaaagaaagttgaaaccaataatgggtttgggaatcttccttatttt
gcattttctcaggaggcaagccaggtactaggtaatttatttgcccattatccgcctggt
gatggaagcctgtgggagatgattggagagaatagtgactctcctgagaaattcaaaccg
aagaaagatgacatttttgctagaccttctatgtcgaaagctgatattgctaagaaaatg
gaagcccttaactctagaatcatgacaacctcaaacctgaaacagatcactgaagataga
tctaagctgccgattgcatccttcaaggataccattgtgtcaactattgaatctcaccag
gtagttctgatatctggtgagacaggttgtggaaagactactcaggttcctcaatttatt
ttggatcatatgtggagtaagggtgaggtatgcaaaatagtttgcacccagcctcgacgt
atctctgcaacttcagtgtctgacagaatagccagtgagagaggagaggctattggggaa
agtgtaggatataagatacgactggaaggcaaaggtggaagaaactcatcaattgtgcta
tgtactactggagttctcttaagggtgttggtatctaaaggttcttgttcatcaaagacg
gggcccataaaggatgacatttctggcattactcacataattatggatgaaattcacgaa
agggaccgatactcagacttcatgttggcaatcatcagagacatgctcccttcatatcct
cgtttacgtctggtacttatgagtgctacaattgatgctgcgagattttctcagtatttt
ggtggatgcccaatcatcaatgttccaggattcacttatccggtcaaaactttctatctg
gaggatgtactttctattataaaatccaaagatggtggtaatcatcttgaagataatacc
gcatctgaaactccaataaacaactgtgagctaagtgaagaagagaagctttctattgat
gaagctattaatttggcttggtttaatgatgagtgggacatgctgtcagagttggtttct
tccgaaggaagcctgaaactgttcaattaccagcattcgttaactggccttactccatta
atggtgtttgctggaaaaggtagggtcggtgatatgtgcatgctcttatcattaggggca
gattgccatttgaggtcccatgatggaaacattgctctagagattgccgaaagggaaaac
cagcaagaagcagccgaaatactcaaaaagcatatggataataatttttcgaactccatt
gaagagaagcagttacttgataaatatcttgctacggtcaaccccgaacttattgatgaa
gttctaatagagcagctgataagaaaaatatgtggagattcagaagatggaggtatcctt
gtctttctcccaggatgggatgatataaacagaacacgtgaacgattgcttgcgtcctct
tttttcaagaatcaatctaagtttatggtcatagctctgcattcgatggttccaagcatg
gagcagaggaaggtatttaagcgcccccctcatggttgccgcaaaatagttctttcaacc
aatattgctgaaacagccatcaccattgatgatatagtgtatgtcatagatacaggacga
atgaaagaaaaaagttatgatccttataataatgtctcaactcttcaatcatcttgggtt
tcaaaagcaagtgctaagcagcgagaggggcgtgctggccgctgtcaacctggtatttgc
tatcatctgtattcaaagattcgagcagcttctttgccagattttcagattccagaaatt
aggagaatatctatcgaggagctttgtctgcaggtgaagttgcttgacccaacttgcaaa
atagaagagtatcttcgcaagacattagatcctccggttttggagtccatacgtcatgca
attttagttctacaagatattggggcattgactaccgatgaaaaactcacagagctcggg
gagaaacttggttctcttcctgttcacccattaactagccggatgcttttttttgctata
ttgatggactgtctcaatccggctttaacggtagcatgtgcatctgattatagagatcca
tttacacttccaatgttgcctgaagaaaagaagagagcttccgctgccaaagctgagctt
gcttctctatatgggggctctggtgatcaatttgctgttgtagctgcatttgaatgctgg
agtaatgcaaagaatatgggtctagaatcccgcttttgttctcagtattttgtttcttcg
tctgctatgcatatgttatctggcatgcggaagcaacttcagaaagaactcgttcggagt
ggctttattcctgaagatgctacgagttacagcatgaatgcgcatgaccctggtgtactc
catgcagttctagtcgcaggtttgtatccaatggttgggagattttcgccaaacaaaaaa
gggaaaagggccataattgaaactgctggtggggataaagttcgcttgcacactcattcc
acaaattttaagttgtcgttaaagaaaaacgcagagcacacgttaattgtgtatgatgag
attactcgcggcgacatgggaatgagcatacggaactgtacagttgttggaccacttcca
ctcttgttgctttcaacagagattgctgttgccccagcacaggataatgatagcggtgat
ggaagtgatgatgacaacgatgatgatgatgatgaagagagcgaagatgaagatgaagat
gaagtcaaacccgaagacgcaatggaagttgataacaaatccagtggtgacacagaagat
aagattatgtcttctcctgaaaatatggttaaagtaatcatggaccggtggctttatttt
ggttcaacagcaatggatgttgctcagctttactgtttgagagagcgattatcagcagca
attctatacaaagtgacacatccaaggaattctcttcctccaatgctaggggcatctatg
catgctatagcttgtatcctgtcatgcgacgggtgctcaggtttgccggtgacatcggat
ggcgtggacacactggctactatggtcaatacaacatatttgggcaagccagctccgggg
acaaggcgattggggaagaagcaaaaagggcagtctacagaacatataaattccgagggg
agtcaaatctctgggccttctagaggcagcatacctgcatcttag
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