Arachis hypogaea (peanut): 112769230
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Entry
112769230 CDS
T07294
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112769230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112769230
03009 Ribosome biogenesis [BR:
ahf03009
]
112769230
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112769230
Spliceosome [BR:
ahf03041
]
Complex A
U1 snRNP components
U1 related factors
112769230
Complex B
112769230
Ribosome biogenesis [BR:
ahf03009
]
Eukaryotic type
Pre-60S particles
Helicases
112769230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Motif
Other DBs
NCBI-GeneID:
112769230
NCBI-ProteinID:
XP_025669471
LinkDB
All DBs
Position
18:complement(1810108..1813951)
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AA seq
501 aa
AA seq
DB search
MSRYDSRAADPASYRDRRSDSGLGAPPASASASASSRRDYDDGGASPRKLNLDGLPHFEK
NFYHESPSVRAMTESEVDDYRLRREITVEGRDVPKPVKSFHDVGFPEYVLQEIKKAGFVE
PTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPT
RELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNH
TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYN
PYKVIIGSSDLKANHAIRQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQIT
RQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDF
PGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQRVSPELAAMGRGA
PPPPSGFRDRGKGYGSSRPWS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttacgacagccgcgccgccgacccagcttcctatcgtgaccggagaagcgat
tcggggctaggagcacctccggcttcagcttcagcttcagcttctagtagaagggattac
gatgacggtggagcctccccaaggaagctcaatttggacggcttgccccatttcgagaag
aatttctaccatgaatcgccttccgttagggcaatgactgagtccgaggttgacgactac
cgtctccgcagggaaatcaccgttgaaggccgtgacgtccccaaacctgtcaagtccttt
cacgatgttggctttccagaatatgtactgcaagagattaagaaagctggctttgtcgaa
cctacgcccattcaatctcagggttggccaatggctttgaaagggcgcgatctgatcgga
attgcggaaacagggtcagggaagacgcttgcttacttgttgccagccatagttcatgta
aatgctcagccaattctagatcctggagatggaccaattgtgttagttttggccccaact
cgtgaacttgccgtccaaatacaacaggaggctactaaatttggtgcgtcgtcaaggatt
aagagtacatgcatctatggtggggttccaaaggggcctcaggtgcgtgatctccagaaa
ggcgttgagattgtaattgctactcccggaaggttaattgatatgcttgagtcaaatcat
actaacttgcggagggtcacatacctagtattggatgaagctgataggatgttggacatg
gggtttgatcctcagataaggaagattgtctcacagattcgtccagatcgtcagactctg
tactggagtgctacctggccaaaggaggttgaacaattggcaaggcagttcctttataac
ccatacaaagtaattataggttcttcagatttaaaagctaaccatgccatacgacaatat
gttgacattgttcctgaaaagcagaaatatgacaaattggtgaagctgctggaggacatc
atggacggcagccgaatactgatattcatggataccaagaagggatgtgatcagatcact
aggcagctccgcatggatggttggcccgcactatcaattcatggagataaaagtcaagca
gaaagagattgggtgctctcagagtttaaatctggaaagagtccaataatgactgcaaca
gatgtggcagctcggggtttagatgtgaaggatgtgaagtatgtgataaattatgacttc
ccgggatcacttgaagattatgtacatcgtattggtcggacagggagagctggtgcaaaa
ggaactgcatacacgtttttcacagctgctaatgccagatttgcaaaggaacttataacc
atacttgaggaagctggacaaagagtgagccctgaattggctgcaatggggcgtggtgca
cctcctccgccatcaggtttccgagaccgagggaagggttatggcagcagtcgcccgtgg
agctaa
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