Arachis hypogaea (peanut): 112769296
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Entry
112769296 CDS
T07294
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
KO
K12856
pre-mRNA-processing factor 8
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112769296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112769296
Spliceosome [BR:
ahf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112769296
Complex C
U5 SnRNP specific factors
112769296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
112769296
NCBI-ProteinID:
XP_025669550
LinkDB
All DBs
Position
18:379771..390798
Genome browser
AA seq
2358 aa
AA seq
DB search
MWNNGQIAPPGTTVPPIPPPPAPQPSYTVLPPVPPAPAPPETEADAEARLEEKARKWQQL
NSKRYSDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFIPHAVY
KLLENMPMPWEQVRDVRVLYHISGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRH
FKRMRFPPFDDEEPPLDYADNILDVDPLEPIQLELDEEEDSAVYTWFYDHKPLVKTKLIN
GPSYRRWHLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEP
LYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHTPMVMYIK
TEDPDLPAFYYDPLIHPITSANKERRDKRIYDEDEDDDWTLPDGVEPLLKDTQLYTDTTA
AGISLLFAPRPFNMRSGRMRRAEDIPLVSDWYKEHCPPSYPVKVRVSYQKLLKCFVLNEL
HHRPPKAQKKKHLFRSLQATKFFQTTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLD
YNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANVQFRLGNVDAFQLADGLQ
YTFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLF
FLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPE
GIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRE
RIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLES
RKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALS
RIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNW
IKPADSEPPPLLVYKWCQGINNLQGIWDTGDGQCVVMLQTKFEKFFEKIDLTMLNRLLRL
VLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRAS
EIAGPPQMPNEFITYWDTKVETRHPIRLYSRYIDRVHILFRFTHEEARDLIQRYLTEHPD
PNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYS
KDNPNLLFSMCGFEVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMK
VFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTR
IKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSQQTDVGVTHFRSGMS
HEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPR
INTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQAL
GGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWW
SPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLD
QELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASN
KYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGIDLAYNLHSAFGNW
FPGSKPLLQQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIW
FVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAK
WKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLK
IEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDK
TIITEPHHIWPSLTDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITP
PSQQRQQIAEIEKQAHEANQVTAVTTKTTNVHGEELIVTTTSPYEQAAFGSKTDWRVRAI
SATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQIAGYLYGISPPDNPQ
VKEIRCIVMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHAK
ILESNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEK
VQMLLSDRFLGFYMTPDNGPWNYNFMGVRHASGMKYGVKLGTPKEYYHEDHRPTHFLEFS
NMEEGETIAEGDREDTFS
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacaacggccagattgccccgcccggaaccaccgttccacccattcctccacct
cctgcgcctcagccttcctacacggtgcttccgccagtgcctccagctcctgccccaccg
gaaaccgaggccgatgcggaggcgcggctcgaggagaaggccaggaaatggcagcagttg
aattcgaagcgctacagcgacaagaggaagttcggttttgtggagacgcagaaagaggac
atgcctcccgagcatgtcaggaaaatcatcagggatcatggtgatatgtcttcaaagaaa
tatcgtcatgataaacgtgtttatcttggagcactcaaattcatcccgcatgctgtttac
aagctcctggaaaacatgcctatgccgtgggagcaggtccgtgatgtaagggtcttgtat
catatttctggggctatcacgtttgtcaatgaaataccctgggttgtggagcctatatat
ctggcacagtggggtacaatgtggatcatgatgagaagagagaaaagggatcgtcgccat
ttcaagaggatgcggtttcccccatttgatgatgaggagcctccgttagactatgctgat
aacattttagatgttgatcctttagagcctattcagctggagctggatgaagaagaagat
tctgctgtgtatacttggttttatgaccataagcctcttgtgaaaacaaagctcattaat
ggtcctagttaccgcagatggcatctttcccttcctataatggcaaccctgcatcggctg
gctgggcagcttctttctgatttaattgaccgcaactatttctatttatttgacatggaa
tcattcttcacggcaaaggctttgaacatgtgcatacctggtggccctaaatttgagcct
ctctatcgtgacatggagaagggagatgaggactggaatgagttcaatgacatcaataaa
ctcattataaggtcccctttgcggacagagtacagaatcgcctttcctcatctttataac
aataggcctcgcaaagtaaaactttgcgtgtatcatactcccatggtgatgtacataaaa
actgaagatcctgatctacctgctttctattatgaccccttaatacacccaataacaagt
gccaacaaggaacggcgggacaagagaatttatgatgaggatgaggacgatgattggaca
ttgccagatggtgttgaacctttgcttaaagatacccaactttatacagataccactgct
gctggaatctccttgctgtttgctccccgtccttttaacatgaggtctggtcggatgagg
agagctgaggatattcctcttgtatcagattggtataaggagcactgtcctccatcttat
ccagttaaagttcgggttagttatcagaagttactcaagtgttttgtgttgaatgagctg
catcatagacctcctaaggctcagaaaaagaaacatttattccgatctcttcaagcaacc
aagttttttcaaactacggaactggattgggttgaagcgggtcttcaagtttgtagacag
gggtataacatgttgaatctcttgatacacaggaaaaatttgaactaccttcacctggac
tataatttcaatcttaagcctgtcaaaaccttgacaacaaaggaaaggaagaagtcacgg
tttggtaatgcctttcatctttgtcgtgagatccttcgtttgacgaaacttgtggttgat
gccaatgttcagttccgcttgggtaatgttgatgctttccagctggcagatggcctccaa
tatactttttcacatgttggtcaattgactggtatgtatcgatataagtataggcttatg
cgacaaataagaatgtgcaaggacttgaagcatttgatctactaccgctttaacactggg
ccagttgggaagggacctggttgtggattttgggcacccatgtggagggtatggttgttc
tttcttcgtggtattgttccccttcttgagagatggctaggcaatttacttgcacgacag
tttgagggtcggcactcaaaaggtgtagcgaagaccgtcaccaaacagcgtgttgagagc
cactttgacttggagcttcgagcagccgttatgcatgatgtgcttgatgccatgccagaa
ggtataaaacaaaataaggcaagaactatattgcaacatttgagcgaggcatggcgttgt
tggaaagcaaatattccttggaaggttcctggtctgcctgttcctatagagaacatgatc
cttcggtatgtgaaatcaaaagcagactggtggacaaatgttgctcattataatcgtgag
cgtataagaagaggtgcaactgttgacaagactgtctgtcgtaagaatctaggaagattg
acacgtctctggcttaaagcagagcaggagcgacaacacaattatttgaaagatggtcca
tatgtcactccagaagaagctgttgctatatatacaacaacagttcattggttggaatca
cggaagttctcccctattccatttccacctctatcatacaagcatgacacaaagttgctc
attcttgcacttgagagattgaaagagtcctatagtgttgcagtgcgactaaatcaactg
caaagagaggagttggggctcattgagcaagcttatgacaatcctcatgaagctttgtca
cgaatcaagcgacaccttctgacacagcgtgcattcaaagaagttggtatagagtttatg
gatttatatagctacttgattccagtctatgagatagagcctctggagaagatcacagat
gcatatcttgatcagtacctgtggtacgaaggtgataagcgtcatctctttccaaactgg
atcaagccagcagattcagagccaccacctcttttggtttacaaatggtgtcagggtata
aataatttgcaaggtatatgggacaccggtgatggtcagtgtgttgtgatgctgcaaacc
aagtttgagaagttctttgaaaagattgatttaacaatgctaaacagacttctgcgactg
gttctggaccataatattgctgattatgtcactgcaaagaacaatgttgtgctgtcatac
aaggatatgagccatacaaattcatatggtcttatacgtggtctacagtttgcatccttt
gttgtccaatattatgggttggtattggatctattgcttcttggactgactcgtgctagt
gagattgctggcccaccacaaatgccaaatgaatttatcacttactgggacacaaaagtt
gagacaaggcatcccattaggctgtattctcggtacatagatcgggttcatatattattt
cgctttacccatgaggaggctcgagatcttattcagcgatatctcactgaacaccctgat
cccaacaatgagaatatggtgggctacaataataagaagtgctggccaagagatgcaaga
atgaggcttatgaaacatgatgttaatcttgggagaagtgtcttttgggatatgaagaat
cgccttcctcgtagtattacaactttagaatgggagaatagctttgtttctgtttacagc
aaagacaatccgaacttgctctttagcatgtgcggattcgaagtacggatactcccaaaa
attagaatgacacaagaagcatttagcaacacaagagatggtgtctggaatctacagaat
gaacagacaaaagaaaggacagctgtggctttcctaagggttgatgatgagcacatgaaa
gtgtttgagaaccgtgttaggcagattcttatgtcttctggttcgactacattcacaaaa
attgtcaataagtggaatacagctttaatagggctcatgacctacttccgagaagctact
gtacatactcaagagctgttagatttgcttgttaaatgtgaaaataaaattcagactcgt
attaagattgggctcaattcaaagatgcctagcaggtttccacctgtcatcttctatact
cccaaagaaattggagggctcggaatgttgtccatgggtcatattttgattccacaaagt
gaccttcggtatagccaacagacagatgttggtgtaacccacttcaggagtgggatgagc
catgaggaggaccagttgattcccaatctttatcgctatatacagccttgggagagtgaa
ttcattgattctcagcgagtctgggcagaatatgcattgaaaaggcaggaagcacaagca
caaaacagacgtctgacccttgaagatttggaagattcttgggatagaggaataccacgc
attaacacactgtttcagaaggatagacacacattggcttatgataaaggatggagggtg
cgaacagacttcaagcaataccaagttctgaaacaaaatcccttttggtggacgcaccaa
agacatgatggaaagttgtggaacttgaacaattaccgaaccgatgttattcaagctctt
ggaggtgttgaaggaattctcgaacatactctgttcaaaggaacatattttcccacttgg
gaaggtctcttctgggagaaggcgtcaggcttcgaggaatctatgaagtataagaagctc
accaatgctcagagatctggtctgaatcaaattcccaaccgtagattcactctttggtgg
tctccaaccataaatcgtgccaatgtttatgtgggttttcaagtgcagctagatctgact
ggtattttcatgcacgggaagattcctaccctgaagatctctcttattcagatattcaga
gctcacttgtggcagaagatacatgaaagtgttgtgatggatctctgccaggttttggat
caagagttggatgctctagagattgaaactgtccagaaggaaacaatccatccaaggaag
agttacaaaatgaacagctcttgtgcagacattcttctttttgctgcccataggtggcca
atgtcaaagcccagccttgtggctgaatctaaggatgtctttgatcagaaggcaagcaat
aagtactggattgatgtccaacttcggtggggtgattatgactctcatgatattgagcgt
tacactagggccaaattcatggattacacgacggataatatgtctatatatccatcgcct
actggggtaatgattggcatcgatttggcatataacttgcactctgcatttgggaactgg
ttccctgggtcgaaaccactgcttcagcaggccatgaataagatcatgaagtctaatcct
gcactgtatgtgctgagggaacgtatcaggaaaggtctgcagttgtactcttctgagccc
actgaaccatatctgtcttctcaaaactatggagagatattcagcaaccaaataatatgg
tttgttgatgacactaatgtgtatcgtgttacaatccacaaaacttttgaaggaaatctt
acaacaaaacctatcaatggtgccatatttattttcaatccgaggactggacaactgttt
ttgaaggttatacatacaagtgtatgggctggtcaaaagcgtcttggtcagttggcaaag
tggaaaactgcggaagaagttgctgctcttgtaaggtcattgccagttgaagaacagcct
aagcaaatcatagtcactcgtaaaggaatgttggatccattggaggttcatctgctggac
ttccccaacattgtcattaaaggaagtgaacttcagcttcctttccaggcttgtttgaag
atcgagaaatttggggatcttattttgaaggccacagaaccgcaaatggttttgttcaac
atttatgatgactggctgaagagtatttcgtcatatactgcattctccaggctgattctg
attctgcgtgctcttcatgtgaataacgagaaggcaaaaatgctactgaaaccagacaaa
acaatcatcactgaacctcatcatatctggccgtctctaactgatgaccagtggatgaag
gtggaggttgcattaagagatctcatactctcagattatgctaagaaaaataatgtgaat
acttcagctctgactcagtctgaaatccgggatattatacttggtgctgagattacccca
ccttctcaacagaggcaacagattgcagagattgaaaaacaggcacatgaagcaaaccag
gttacagctgtaacaacgaagaccacaaatgttcatggtgaagaacttatagtgaccact
actagtccatatgagcaagctgcttttggttccaagaccgactggcgtgttagagcaata
tcagccaccaacttataccttcgtgtaaaccatatatatgtgaactcagaggacataaag
gaaactggatacacatacattatgccaaagaacattttgaagaagttcatatgcatagca
gatcttcggacacaaattgctgggtatctgtatggcataagtcctccagacaaccctcag
gttaaggaaattcgttgtattgtgatgccaccacagtgggggactcatcaacaagtccat
ctcccgtcggctcttccagagcacgatttcttgaatgacttggagccgttgggatggatg
catactcaaccaaatgaacttcctcagctgtcgccacaggatcttacctcacatgctaag
atcctagagagcaataagcaatgggacggggagaaatgtattatcttgacatgcagtttt
actccaggttcctgttctttaactgcatacaagctcactccttctggttatgaatgggga
cgtgtcaacaaggacacaggaagcaatcctcatggttaccttcccactcactatgagaag
gttcagatgctccttagtgaccgctttcttggtttctacatgactcctgataatggtcca
tggaattacaacttcatgggggtcagacatgcatccgggatgaagtatggagtgaagctt
gggacacctaaggagtattatcacgaggaccacagaccaacccatttcttagagttcagt
aatatggaggaaggggagacaattgccgagggagatcgagaggacacattctcttag
DBGET
integrated database retrieval system
