Arachis hypogaea (peanut): 112771128
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Entry
112771128 CDS
T07294
Name
(RefSeq) protein PAT1 homolog
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112771128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112771128
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112771128
mRNA degradation factors
5'-3' decay
Decapping complex
112771128
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
112771128
NCBI-ProteinID:
XP_025671542
LinkDB
All DBs
Position
18
Genome browser
AA seq
885 aa
AA seq
DB search
MVDMDVFGAGGDLGAAPSTQDLRQLGGASSEGAVFDASQYAFFGKDAVQEVELGGLEDDD
YLPRVESKEDFFFNRDEAEDVRSLSDIDDLTTTFMKLNKNVSGPRSPGVIGDRGSRENST
SEWPQRDDMNWPDHMNAYDSEGSLDGKRWSSHPHSSLAHLNEPKPLYRTSSYPDQQRQPQ
QYQLQHRSSEPVANWLDQLFYETETSQDGKRWSSQPHSSFPQLQESKPLYRTSSYPEKQP
ELTRYSSEPILVPKSSFTSFPPPGGRSQQTSPSHSASHLNISYHAGGAQMGVSSQNLSHL
SNSALQLSGLNHGSHFGGNMRQFPTGSALQRIQNQLVNQAALYPGDHSNLLSNMLQQQLH
LHNGSISSHLMTQLQQQQHRLHHPVQQSASYLSGFKSHLFNPHLSSSSSLGKYEHMLGLG
DVRDHRPKSNQKGKHSLRFSQQNSDAGSQKSESGSLQFRSKYMTSDEIESILRMQHAVTH
SNDPYVDDYYHQACLAKKAPVAKSKNLFCPTQIREVPARSRSNSDQHAFLQVDAMGRITF
SSIRRPRPLLEVDPPNSSFTSSSEQGISEKPLEQEPMFAARVTIEDGLCLLLDVDDIDRF
LKCNQLQDGGSQLRRRRQVLLEGLATSLQLVDPLGKNGHKVGLAAKDDVVFLRLVSIAKG
RKLLAKYLRLLLPGSELMRIVSMAIFRHLRFLFGGLPADPASLETTSDLAKIVCQCVQGM
DLGALSACLAAVVCSAEQPPLRPLGSSAGDGASLILVSVLERATELLTDHHAACNYNMGN
RSFWQASFDEFFGLLTKYCMNKYQSIMQSLLIQNPANVDDIGSDAAKAISKEMPVELLRA
SLPHTDDRQRKLLLDFAQRSVPVVGFNNNAGSSGGSHVNSETVLS
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggtggatatggatgtttttggagctgggggtgatcttggagcagctcctagcacacag
gatcttaggcaattagggggtgcttcctcagaaggagcagtttttgatgcatcacaatat
gcgttctttggtaaagatgctgtccaggaagttgaattgggagggttagaagatgatgat
tatttgcctcgagttgaatctaaagaggatttctttttcaatagagatgaggctgaggat
gtaagatcgctttccgacattgatgatctcaccactacttttatgaagttgaacaagaat
gtgagtggaccaagaagtccaggagttattggcgatcgaggatcacgagaaaattcgact
tctgaatggccacaaagggatgatatgaactggcctgaccacatgaatgcttatgatagt
gaaggttctctggatggcaaaagatggtcatcgcatccccattcttctctcgcccattta
aatgaacctaagcccttgtacagaacgtcttcctatcctgatcagcaaaggcagccacaa
caataccaactccagcatcgctctagtgaacccgttgctaactggcttgatcaacttttt
tatgaaactgaaacatctcaggatggcaaaagatggtcatcacagccacattcctccttc
cctcagctacaagaatcaaagcctttgtacagaacatcttcatatcctgaaaagcagcca
gagcttactcgttattccagtgaaccaattttggtaccaaagtcttcatttacttctttt
cctcctcctggtggcaggtctcagcagacttctcctagtcatagtgcaagccacttgaac
atttcatatcatgctggaggagctcagatgggagtttcatctcaaaatctatctcatctt
tctaattctgcactacagttgagtggattaaaccatgggtctcattttggtggaaacatg
cgccagtttcctactggttctgctcttcagcgaattcagaaccaactggtcaaccaggca
gcgttatatcctggagatcattcaaaccttcttagtaatatgttgcagcagcaattacac
cttcacaatggatcaatatcttcacacttaatgactcaattacagcaacagcaacacaga
ttgcatcatcctgttcagcaatctgcaagctatttatcaggtttcaagtcccatttattt
aacccccacctttcttctagctcgtctcttggaaaatatgaacatatgcttggtctgggt
gatgttagagatcataggccaaaatcaaatcaaaaaggaaaacatagtctccgtttctcc
caacagaattctgatgccggtagccagaagagtgaaagtggttcattacagtttaggtcc
aaatatatgacaagtgatgaaattgagagtattcttagaatgcagcatgctgtgactcat
agtaacgacccgtatgtggatgactattatcaccaagcttgtcttgcaaaaaaggctcct
gtggcaaagtcaaaaaatttgttttgcccaacccagataagggaagttcctgcacgatct
cgttctaattctgatcagcatgcttttctccaggttgatgccatgggtaggattacattc
tcatctattcgacgccctcggcctcttttggaggttgatcctccaaactcttcttttacc
agtagctctgagcaaggcatttcagaaaagcctcttgaacaggagcctatgtttgcagct
agagtcacaattgaggatggtctgtgtttgctccttgatgtagatgatattgatcgtttc
ctaaagtgtaatcagctacaagatggggggagccaattaagacgaagacgacaggtcctg
ttggaaggattagcaacttcacttcagcttgttgacccactggggaaaaatggacataaa
gttggacttgctgctaaggatgatgtagttttcttgagattagtatctattgccaaggga
cgtaagctccttgcaaagtatcttcggttgcttcttcctggtagtgaacttatgaggata
gtctctatggcaatcttccgtcatctaagattcttatttggtggtctccctgcagatcca
gcatctttggagactacaagtgaccttgctaaaattgtctgccaatgtgttcaaggaatg
gatcttggtgctctcagtgcttgtcttgcagcagttgtttgttctgcggagcagcctcct
cttcgtcctcttggaagctctgctggagatggggcttctcttattttagtatctgttctt
gagagggctactgaacttctaactgatcatcatgctgcatgcaactacaatatgggtaat
cgttcgttttggcaggcctcatttgatgaattctttggccttctgacaaagtattgcatg
aataaataccaaagtatcatgcaatccctgcttatacaaaatccagcaaatgtcgatgac
attggatcggatgcagctaaagcaattagcaaggaaatgcctgttgaactccttcgtgca
agtctccctcacactgatgaccgccagcggaagttattactggatttcgcacagcgctcg
gttcctgtggttggatttaacaataacgcaggcagtagcggcggcagtcatgtgaactca
gagacagtgctaagttga
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