Arachis hypogaea (peanut): 112775765
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Entry
112775765 CDS
T07294
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15 isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03013
Nucleocytoplasmic transport
ahf03015
mRNA surveillance pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112775765
09122 Translation
03013 Nucleocytoplasmic transport
112775765
03015 mRNA surveillance pathway
112775765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112775765
03041 Spliceosome [BR:
ahf03041
]
112775765
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112775765
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112775765
Spliceosome [BR:
ahf03041
]
Complex C
Other components
EJC/TREX
112775765
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112775765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
112775765
NCBI-ProteinID:
XP_025675386
LinkDB
All DBs
Position
19:complement(2491836..2496027)
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AA seq
495 aa
AA seq
DB search
MLEPKRSVEHHRVIFVITVVAGCYIFSVPFLLFLLSSLCCFSLKPRSRVLFHFNSLQTLN
SQIYAIAQRMGELKDTEAYEEELIDYEEEDEKAPDSAKPAAESGKKGYVGIHSSGFRDFL
LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPLP
GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVG
TPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHEKQVMMFSATL
SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQESEKNRKLNDLLDALDFNQVV
IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGRQRILVATDLVGRGI
DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSTADSEVLNQVQSRFEVDI
KELPEQIDTSTYMPN
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgctggagcctaaaaggagtgtggagcatcacagggtcattttcgtaataacggtggtt
gctgggtgctatatcttctccgttcctttccttctttttcttctctcctctctctgttgc
ttctctctaaaacccagatctagggttttgtttcacttcaattcgcttcaaactttaaat
tcccaaatctacgcaatagctcaaaggatgggcgaattgaaggataccgaggcttacgag
gaagagctcatcgactacgaagaagaagatgaaaaagcccccgattctgcaaaacctgct
gctgaatccggcaagaagggatatgttggcatccatagctcaggattccgagacttcctg
ttgaaacctgagcttcttcgagctattgtcgattcaggattcgagcatccatccgaagtg
caacacgagtgcatccctcaagcaattttaggaatggatgtcatttgtcaagcaaaatct
gggatgggaaaaactgcagtttttgttctttcaacacttcagcaaatcgatcctcttcct
ggtcaagttgcagctcttgttctttgccatacgagagagctagcttatcagatttgccat
gaatttgaaaggttcagcacatatcttcctgatatcaaagttgctgttttctatgggggt
gtcaatattaaggttcacaaagaattgcttaagaatgaatgtcctcatattgtggttgga
acacctgggaggattcttgccctgactagagataaggaccttggcttaaagaatgtgagg
cattttattcttgatgagtgtgacaagatgcttgaatcacttgacatgaggagagatgtg
caagagattttcaaattgactccccatgaaaagcaagtcatgatgttttctgctacactc
agcaaagagatccgacctgtttgcaagaaatttatgcaagatccaatggaaatttatgtg
gatgatgaggccaagttaacacttcatggtcttgttcagcactatatcaaattgcaagaa
tcggagaagaatcgtaagttgaatgatcttcttgatgctctggacttcaaccaagttgtt
atttttgtaaaaagtgttagcagagctgcagagttgaacaagttgcttgtggagtgcaac
ttcccttcaatatgtatacattctggaatgtcacaggaagaaaggttgaaacgatacaaa
ggcttcaaagaagggaggcaaaggattcttgttgcaacagacttagtaggaaggggtatc
gacatagaacgggttaacatagttatcaactatgacatgcctgattctgctgacacttac
ctgcacagggtaggaagagctggtagatttggcaccaaggggcttgcaattacttttgtc
tcttcaacagctgactctgaagttcttaatcaggtgcaatcaaggtttgaagttgatata
aaggagcttccagaacaaattgacacctccacatatatgccaaactga
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