Arachis hypogaea (peanut): 112777339
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Entry
112777339 CDS
T07294
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112777339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112777339
03041 Spliceosome [BR:
ahf03041
]
112777339
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112777339
Spliceosome [BR:
ahf03041
]
Complex B
Other components
Prp19-related factors
112777339
Complex C
112777339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
Mad3_BUB1_I
TPR_19
ARM_TT21
ARM_TT21_C
NRDE-2
UTP6_C
Motif
Other DBs
NCBI-GeneID:
112777339
NCBI-ProteinID:
XP_025677478
LinkDB
All DBs
Position
19:complement(5383124..5389756)
Genome browser
AA seq
917 aa
AA seq
DB search
MPSSSSISQDLYPSQDDLLYEEEILRNPFSLKLWWRYLIARSESPFKKRFVIYERALKAL
PGSYKLWHAYLRERLDLVRNLPITHSQYDTLNNTFERALVTMHKMPRIWIMYLQTLTHQK
LLTRTRRTFDRALCALPVTQHDRIWEPYLVFVSQRGVPIETSLRVYRRYLKYDPSHIEDF
IEFLVNSCLWQEAAERLASVLNDGTFFSIKGKTRHRLWLELCELLTRHANEVSGLNVDAI
IRGGIRKFTDEVGRLWTSLAEYYIRRGLHEKARDVFEEGMSTVVTVRDFGVIFDSYSQFE
ESMLAYKMEEMGMSDEEEEDNGEENGFGDGEEEDVRFKGEDFERKILRGFWLNDKNDIDL
RLARFDYLMERRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTRQILTYTEAVRTIDPMK
AVGKPHTLWVAFAKLYEHHKDLANARVIFDKAVQVNYKTVDNLASVWCEWAEMELRHKNF
KGALDLMRRATAEPSVEVKRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGTLESTRAV
YERILDLRIATPQIIINYAYFLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVK
RYGKTKLERARELFENAVETAPADQVKPLYLQYAKLEEDYGLAKRAMKVYDEATKAVPND
EKLSMYEIYIARASEIFGVPKTRQIYELAIQSGLPDKDVKTMCLKFAELEKSLGEIDRAR
AIYGHASQFANPRSDPEFWEKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYL
MQKDQTVNLDEAKDKLKQAGVPEDEMAALERQLAPATNDTATKERKVGFVSAGVESQTDG
GLRVSANHEDIELPEESDSDDEEKVEIAQKDVPSAVFGSLVRGRDEGGMNGEADGTKDQD
NESRLGALERIKRQKTK
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgccttcatcatcgtcaatttctcaggacctgtacccttcccaagacgaccttctgtac
gaggaagagattctccgaaaccctttcagcctcaagctatggtggcgatacctaattgct
cgttccgaatctcccttcaagaaacgtttcgtcatttacgaacgcgctctcaaagccctt
ccaggttcctacaagctctggcacgcttacctccgcgagcgcctcgatctcgttcgaaac
ctcccaatcactcactctcaatacgacacactcaacaacactttcgagcgtgctctcgtc
actatgcacaagatgcctcgaatctggatcatgtacctccaaaccctaacccaccagaag
cttcttacaagaaccaggagaaccttcgatcgagctctttgcgctttgccggtcactcag
catgataggatctgggaaccctatttggttttcgtgagtcagaggggtgtgcccatagag
acttctcttcgggtttatcgtaggtacttgaagtatgatccttcccatattgaggatttt
attgagtttttggtgaattcttgcttgtggcaggaggctgctgaaaggttggcttcggtt
ttgaatgatggcacgtttttctcgattaaggggaagactaggcatagattgtggttggag
ttgtgtgaattgctcactaggcatgctaatgaggtctcggggttaaatgtagatgccata
attaggggcgggattaggaagttcactgatgaggttggcaggttgtggacttcgttggcc
gagtattatattaggaggggtttgcacgagaaggcgagggatgtgttcgaagaagggatg
tcaactgttgtgactgttagggatttcggtgtgattttcgattcgtattcacagtttgag
gagagcatgcttgcttacaagatggaggagatgggaatgagtgacgaggaggaagaagat
aatggtgaagaaaacggttttggggatggggaagaggaggatgttcggtttaaaggggag
gattttgagaggaagatcttacgtgggttttggttgaatgacaagaatgacatagacttg
aggttggcacgttttgattaccttatggaaaggaggccggagttggctaacagtgtgcta
ttgcgccagaatcctcacaatgtggagcagtggcatcggagggtgaagctttttgagggt
aatcctacgaggcagatactgacttataccgaggctgtcaggacaattgatcccatgaag
gcagtgggaaagcctcatactttgtgggttgccttcgccaagctgtatgaacatcataaa
gatcttgccaatgcccgggtcatatttgacaaggcggtacaagtgaattataaaactgtg
gataatctggctagtgtctggtgtgagtgggcagaaatggagttgagacataagaatttt
aaaggagcacttgatcttatgaggcgggctacagcagaaccatcagttgaagtcaaacga
agagtggctgctgatgggaatgaaccagttcagatgaagttgcataaatctttgagattg
tggaccttttacgtcgatttggaggagagtctaggtactttggagtctacccgggctgtt
tatgagcggatattagatttacgaatagccacaccacaaataattattaattatgcctac
tttctggaggaacataaatactttgaagatgcttttaaagtgtatgaaagaggggtgaag
atattcaagtatccacatgtgaaagacatatgggtcacatatctgtctaaatttgtgaag
agatatggaaagacaaaattggagagagcaagagagctgtttgagaatgcagttgaaacg
gctccagctgatcaagtgaagcctctttacctgcaatatgctaagctggaggaggactat
ggactagccaagcgagccatgaaagtgtacgatgaagcaactaaggctgttcctaatgat
gagaagttaagcatgtatgaaatatacattgctcgtgcatctgagatatttggtgtaccc
aaaactaggcagatctatgagctggcaattcaatctggtcttccggacaaagatgtcaaa
actatgtgcctaaagtttgctgagctggagaaaagcttgggagaaatagatcgagcacgt
gcaatatatggacatgcctctcagtttgccaatccacgatcagatccggaattctgggaa
aagtggcatgaatttgaagttcagcatggaaacgaagataccttcagagagatgcttcgc
attaaacgaagtgtctctgcaagctacagccagacacatttcatattgccagagtatctg
atgcaaaaggatcagactgtgaatcttgatgaagccaaagacaagttgaaacaggctggg
gtccctgaggatgaaatggctgctttagaaaggcaactagccccagcaacaaacgataca
gcgaccaaagagagaaaagtagggtttgtgagtgctggagttgaatcacagactgatgga
gggttaagagtcagtgcgaatcacgaggatattgagttaccagaagaaagtgactctgat
gatgaggaaaaggttgaaattgcacaaaaagatgttccttctgctgtttttggcagtttg
gttcgaggtagagacgagggtggaatgaatggagaagcggatggtactaaagatcaagat
aatgagagtcggcttggtgcccttgagagaataaagaggcaaaaaacaaaatga
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