Arachis hypogaea (peanut): 112779301
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Entry
112779301 CDS
T07294
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like isoform X2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112779301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112779301
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
112779301
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
112779301
NCBI-ProteinID:
XP_025679334
LinkDB
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Position
19:28175972..28177674
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AA seq
141 aa
AA seq
DB search
MSACPGKVLYKDRKVRLRNRITIAAIDLCTVESEIEGLKLGPSLQNLEPAWQIGECVARW
WRPNFKTYMYSYCPPHITKSKECRVLYMVHLSDRGYFEVPGDLALLAVPMFQLCDNVQKY
GSINSSIPQQLSRFEFRMINN
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcctgccctggaaaggttttatacaaagatcgcaaagtaaggctaagaaacagg
attactatcgccgccattgatctctgtacagttgagagtgaaattgagggattgaagctc
ggtcctagtttgcaaaatcttgagcctgcctggcagataggtgaatgtgtggcaagatgg
tggagaccgaacttcaaaacctatatgtattcatactgtcctcctcacataacaaaatca
aaggagtgcagagtgctttacatggtccatttatctgataggggatactttgaggtgccg
ggagatctagcacttcttgctgttccaatgtttcaactgtgtgacaatgttcagaaatat
ggttccattaattccagcattcctcagcagctttccagattcgagtttagaatgatcaac
aactaa
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