Arachis hypogaea (peanut): 112779840
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Entry
112779840 CDS
T07294
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03020
RNA polymerase
ahf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112779840
09124 Replication and repair
03420 Nucleotide excision repair
112779840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahf03021
]
112779840
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112779840
Enzymes [BR:
ahf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112779840
Transcription machinery [BR:
ahf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
112779840
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
112779840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
112779840
NCBI-ProteinID:
XP_072083285
LinkDB
All DBs
Position
19:complement(136760229..136767621)
Genome browser
AA seq
1752 aa
AA seq
DB search
MDIRFPYSPAETANVRTVQFGILSPDEIRRNSVVEIEHGKSSEKGKPKVGGLSDPRLGTV
DRKIRCATCTADMAECPGHFGHLELAKPMFHVGFLKTVLTVMRCVCFNCSKILAREQDKK
FEQALKIGNPKNRLQRILDACKNISKCQGGEDSEELVRIGCGALQPKITIKGIKMIAEYK
APRNKNNDHEQLPNPEERKQILSAERVLGVLKRISDEDCELLGLNPQFARPDWMILQVLP
IPPPPVRPSVMMHSSCRCEESDDLTHQLATIIKHNENLKRHEKNGSPQHILSEFSLLLQF
HITAYFDNELPGLPRATQRTGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPEPN
INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPNPPPGKTGAKYIIRDDGQRLDL
RYLKKSCHPHLEIGYKVERHLMDGDLVLLNRQPSLHKMSTMGHRIKIMPYSTFRLNLSVT
RPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMDIVQDTLLGCRKIT
KRDTFITKDVFMNILMWWEDFDGNVPTPAILKPEPLWTGKQVFNLIIPKQINLTRYSSWH
DDNEGGSSITPGDTMVRIEKGELLTGTLCKKTLGASTGSLIHVIWEDAGPDAARKFLGHT
QWLVNYWLLQNSFSIGIGDSIADASTMEVINQTISVAKEKVKTLFRDAQEKKLESEPGQT
MMDTFEKKVNEVLNEARNDAGKKAQTSLSESNNLKAMVTAGSKGSFINISQMTACLGQQN
VEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGVIDTAV
KTSETGYIQRRLVKAMEDIMVKYDGTVRNSVGDVIQFLYGEDGMDAVWIETQNLDSLKMK
KSDFDRTFKYEFDKENWNPSYMLEGPIEDLKSSIELRNLLEDEFEMLEHDRHLLANEIAT
TGTSSLPLPVNLKRLIRNAQKTFKIDFRRPSDMDPIEIVEAVDKLQERLKVVPGDDLLSQ
EAQKNATVLFNILLRSTLSSKRVLQEYKLSREAFEWLVGEIESRFQQSLVTAGEMIGCVA
AQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLTEIINVAKRIKTPSLSVYLKPEVSRTS
EEAKRVQCELELTTLRRVTQATEVWYDPDPLYTVIEEDVDFVKLYNEMPDEEVALERMSP
WLLRIELNREMMVDKKLSMADIAEEIKHVFDDDLKCIFNYDNAEKLILRIRIVNDEAHRG
EIQDDSADDGFLKRIESNMLTEMTLRGIPGISKVFLKSIDVPKFDDNEGFQTHKEWMLET
EGVNLLAAMCHEQVDATRTISNHLIEIIEVLGIEAVRRALLNELRAVISFDGSYVNYRHL
AILCDTMTYRGHLMSITRHGINQNDTGPMMRCSFEQTVDILLDAAAYAEADHLRGVSENI
MLGQLAPLGTGQCSLYLNDEMIKNAFDLQLPSYMDGLDFGMTPAHFSMSTPYLDGLMSPT
HLSSPNLRPSPINNAVFSPYGMACGYSAYRSDYSISSPAYDPVSPKYTPTSPVYSPVSPS
YSPLSPTYTPTSPAYSPISPAYSPSSPGYSPTSPSYSPISPTYSPSSPWYSPTSPSYSPI
SPTYSPSSPWYSPTSPSYSPISPIYSPSSPEYSPTSPSYSPISPAYIPSSPGYSPTSPSY
SPTSPYYSRLSAEYSPTSPYYSPSSPTYSPSSPKFSPSSPDFSLTSPQFSASMEYSPSQH
GYSPSSTSQYTP
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggatattaggtttccttattcgccggcggaaactgcaaatgtccgtacggttcagttc
ggaattctcagccccgatgaaatcaggagaaactctgtggtggaaatcgagcacgggaag
agctcggagaaggggaagccaaaggtcggagggttgagcgaccctcgccttggaaccgtt
gataggaagatccggtgtgccacgtgtacggctgatatggctgagtgcccggggcatttc
ggtcacttggagctcgctaagccaatgtttcacgttggtttcttgaagacggtgctcacc
gtcatgcgttgtgtttgcttcaactgctccaagattttggcgcgtgagcaggataagaag
tttgaacaagctttgaagattgggaaccctaaaaacaggctgcagaggatcttggatgct
tgcaaaaacataagcaagtgtcaaggtggtgaagattctgaggagctggttcgaattggc
tgcggtgccttgcagcccaagattactattaagggtattaaaatgattgctgagtataaa
gctccgaggaacaaaaacaatgaccatgaacagcttcctaatcccgaagaaaggaaacag
attctttctgcagaaagggttcttggtgttctaaaaaggataagcgacgaggactgcgaa
ttgttgggcttgaatccgcagtttgcgcgtcctgattggatgatcttgcaagttcttcca
attcctcctccaccagtgagaccttctgttatgatgcactcatcttgtaggtgtgaggaa
agtgatgacttgactcatcagttagccacaatcatcaagcacaatgaaaatttgaagaga
catgagaaaaatggatcacctcagcatattctttccgagttttctctgttgttgcagttc
catataaccgcatattttgataacgagttgccgggactgccaagagctactcaaagaaca
ggaaggcctatcaaatcaatttgtagcaggcttaaagccaaagaaggtcggattagagga
aatttgatggggaaaagagttgatttttctgctcgaacggttattacaccagagccgaac
attaacattgatgaacttggagtgccatggagtattgctttgaaccttacataccctgag
actgtaactccatataatattgaaaggttgaaggagcttgtagagtatggacccaatccc
ccacctgggaaaactggtgccaagtacatcattcgtgatgatgggcaaaggcttgatctc
agatatttgaagaaaagttgccatccccatttggagataggatacaaggtggagcgccat
ttgatggacggagacttagttctcttgaatcgtcagcctagtcttcataaaatgtccact
atggggcacagaatcaaaatcatgccttattctacgtttcggcttaatttgtcggtaact
aggccttataatgctgattttgatggggatgaaatgaacatgcatgttcctcagtcattt
gaaaccagagcagaggtgttggagctcatgatggtgcctaaatgcattgtatctcctcaa
tcaaacagaccagtaatggatattgttcaagacacactattaggatgcagaaaaatcacc
aagagagataccttcatcacaaaggatgtatttatgaacattctaatgtggtgggaagat
ttcgacgggaatgttcctacaccagcaatattgaagccagaaccattgtggactgggaaa
caagttttcaatcttattattcccaagcaaataaatttaactaggtattctagctggcat
gatgataacgaaggaggatcatcaataactccaggggatactatggtcagaattgaaaaa
ggggaactacttaccggaactctttgcaaaaagacacttggagcatctactggaagtctc
attcatgtcatttgggaagacgctggccccgatgcagctcgtaaatttcttggtcacact
cagtggcttgtaaactactggcttctgcagaattcttttagcattggaattggtgattcg
attgcggacgcttcgactatggaggttattaaccagactatttcagtggcaaaagagaaa
gtgaaaacactatttagggatgctcaagaaaagaagttggagtctgaacccggtcagaca
atgatggatacatttgagaagaaagtgaatgaggtgctgaacgaagctcgtaatgatgcc
gggaaaaaagcgcagacaagtttatctgagagcaataatctgaaagcaatggtgacagct
ggttccaaaggaagttttatcaacatatctcagatgactgcttgtcttggtcaacagaat
gttgaaggcaagcgaattccatttgggttcatagataggacactgccacactttacaaaa
gatgattatgggcctgaaagccgaggctttgtggagaactcgtatcttcgagggctgacc
ccacaagagttctttttccatgccatgggaggtagggaaggtgttattgatactgcagtg
aagacctctgaaactggatacatccaaaggcggcttgtgaaggctatggaggatattatg
gtcaaatacgatggaactgttaggaactccgtaggagatgtcatacaatttctctatgga
gaagatggtatggatgctgtttggattgaaacacagaatcttgattccctgaaaatgaaa
aagtcagactttgataggacctttaagtatgagtttgataaggagaactggaatcctagt
tacatgcttgaagggcctattgaagacttgaaatccagcatagagcttcgtaatttactt
gaggatgaatttgaaatgcttgaacatgatagacatctgcttgcaaatgagattgccact
actggtactagttctcttccactgcctgttaaccttaagaggcttatcaggaatgctcag
aagacatttaagattgactttcgaaggccttctgatatggacccgattgaaattgtagaa
gctgttgataagctacaggagagacttaaagttgttcctggtgatgatctccttagtcaa
gaagctcagaagaatgctactgtcctgttcaatatccttcttcgcagcactctttccagt
aaaagggtcttgcaggaatataagctttcccgcgaagcatttgaatggttagtgggagag
atagaatcaagattccagcagtcactagtaactgcgggggaaatgattggttgtgtggcg
gcacaatctattggggagccggctactcagatgactctcaacacattccactatgctggt
gtaagtgctaagaatgttacacttggtgttcccaggttaacagaaattattaatgtggcc
aagagaatcaaaacaccttccttgtctgtgtatttgaaacctgaggttagtaggacttca
gaggaggccaaacgtgtgcagtgtgagttagagcttactacacttaggagagtgacacaa
gctacagaggtgtggtatgatccagacccattgtatactgtaattgaagaagatgttgat
tttgtgaagttgtacaatgaaatgcctgatgaagaagttgctcttgaaagaatgtcacct
tggttgcttcgcatagaattaaaccgagagatgatggtggataagaagttgagcatggct
gacatcgctgaggagataaaacatgtgtttgatgatgatttgaaatgtattttcaattat
gacaatgctgaaaagctcatacttcgtatccgaatcgtgaatgatgaagcccaccgggga
gagattcaggatgattctgctgatgatggtttcttaaagagaatagaaagcaacatgctt
actgagatgacattacgtggcatccctggcatcagcaaagtttttttaaaaagtattgac
gttccaaaatttgatgacaatgaaggttttcagactcataaggaatggatgcttgaaact
gaaggtgtaaaccttttagctgcaatgtgccatgagcaagttgatgcaacaaggaccata
agcaaccaccttattgaaattattgaagtccttggaattgaggcagttcggcgggctctt
ctgaatgaattgcgtgctgtcatctcttttgatggatcttatgtcaattacaggcatctc
gctattctttgtgatactatgacttatcgtggccatttgatgtcaattacgcgccatggt
atcaaccaaaatgataccggtccaatgatgagatgctcatttgaacagactgttgatatt
ctccttgatgctgcagcatatgctgaggctgatcacttaaggggtgtcagcgaaaacatc
atgttaggccagcttgcgccccttggcactggacaatgctctctgtatcttaatgatgag
atgattaagaatgcatttgatctccagctacctagttatatggatggtcttgactttggc
atgacacctgctcatttctccatgtcaactccctatcttgatggcttgatgtcaccaact
catttgtccagtccaaatctgcggccatcaccaattaataatgcagttttttcaccttat
ggaatggcctgtggttacagcgcatatcgaagtgactacagtatatcttcacctgcttat
gatccagtttcacctaagtacactcccacttctcctgtatatagccctgtgtcaccaagt
tatagtcctctttccccaacttataccccgacgtctccggcatatagtcctatatcacct
gcatatagcccctcctctcctgggtacagccctacatcaccaagctatagtcctatatca
cctacatatagcccctcctctccttggtatagccctacatcaccaagctatagtcctata
tcacctacatatagcccctcctctccttggtacagccctacatcaccaagctatagtcct
atatcacctatatatagcccctcctctcctgagtacagccctacatcaccaagctatagt
cctatatcacctgcatatatcccctcctctcctgggtacagccctacatcaccaagctat
agtcctacttccccttattacagtcggttatctgcagagtatagtcccacatcaccatac
tatagcccctcatcaccaacttattctccatccagcccaaaatttagtccaagcagtccg
gatttcagcctaacttctccacagttcagtgcttcaatggaatactcgccaagtcaacat
ggttactcaccgtcatcaaccagccaatacactccatag
DBGET
integrated database retrieval system
