Arachis hypogaea (peanut): 112782447
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Entry
112782447 CDS
T07294
Name
(RefSeq) exosome complex exonuclease RRP44 homolog A
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112782447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112782447
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
112782447
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
PIN_4
OB_Dis3
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
CSD2
Acid_phosphat_B
OB_RNB
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
112782447
NCBI-ProteinID:
XP_025680616
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Position
20:complement(604646..613298)
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AA seq
935 aa
AA seq
DB search
MLHNKSFVKKTKAGKVMKQVREHYLRDDIYCGAPFCTACDTSAARLGPSASTILVVDTNV
VLNQIDLLENPAIDDVVVLSIVLEEVKNKNMSVYNRVRAICSNSMRKFFVFSNEYHRDTY
IKEMSGETKNDRNDRAIRVAAQWYQKHLGGAVKVLLITNDKENKRKATEEGIHAETVESY
VKSLDRPDLLDLLVQPSSEDVNMEEVEDLRPSKRKIIYTEHKPMSEITSGLHRGIYHQGK
LRVNRYNPFEAYVGSESIGDEIIIYGRSNMNRAFDGDIVAVELLPQDQWQEEKSLAIACE
EDEDEDDGVHLAPNSADDAPRTVPQQSSTGEVNTTPSRPSGRVVGIIKRNWHSYCGSLDP
MPMPAGSGGVAHALFVSKDRRIPKIRIQTRQLENLLDKRIIVAVDSWDRQSRYPSGHYVR
TIGEIGDRDTESEVVLIENDINSRPFSSQVLACLPPLPWSVSAEDLSNPIRQDLRGLCVF
SVDPPGCKDIDDALHCTSLPNGNFEVGVHIADVTNFVHPGTPLDEEASQRGTSVYLVERR
IDMLPKPLTEDICSLRSDVERLAFSVIWEMTPEADIVSSRFTKSVIKSSAALSYVEAQAR
MDDSRLMDPITTNLRNMNSLAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQI
REANQMVEEFMLAANVSVAEQILKSFPLCSLLRRHPTPTREMLEPLLRTAAAVGLHLDVS
SSKALADSLDHSVGDDPYFNKLIRILATRCMSQAVYFSSGDLTPPEYHHYGLAAPLYTHF
TSPIRRYADVIVHRLLAASLGISKLPPVFQDRLQLTSISDNLNYRHRNAQMAGRASVELH
TLIYFRNRPTDTEARVVKMRSNGFFVFVPKYGIEGPIYLTQKGEKGSGEWYVDEQQQKIK
KMDGSISYSILQTVQIHMEVVEPQPNRPKLQLTLL
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacaacaagtctttcgttaagaaaaccaaagctggcaaggtcatgaagcaagtg
agggagcactacctccgcgacgacatctactgcggcgcccccttctgcaccgcctgcgac
acctccgccgctcgcttgggtccctccgcctccactatcctcgtcgtcgacaccaatgtc
gtcctcaaccagattgatttgctggagaatccagctatcgacgatgtggtggtgctctcc
attgtgctggaagaggttaagaacaagaatatgtctgtttacaatcgagttagagctatc
tgtagcaattccatgaggaagttctttgttttctccaacgaataccacagggatacatat
attaaggaaatgagtggagaaaccaagaatgataggaatgatagagctatccgagtggct
gctcagtggtatcagaaacatcttggcggtgcggtaaaggttttgcttataaccaatgat
aaagagaacaaaaggaaggctactgaagagggcattcatgcagaaacagttgaatcatat
gtcaagtctttggatcgaccagatttacttgacctgcttgtacagccttcatcagaagat
gtaaacatggaagaggttgaagatctcagaccatcgaagaggaaaatcatctatacagag
cataagccgatgtcagaaattacttctggattgcatcgaggaatatatcatcaagggaaa
cttcgtgtgaaccgttacaacccatttgaagcatatgttggaagtgagagcattggggat
gaaataattatttatgggcgctcaaacatgaaccgagcttttgatggtgatattgtggcg
gttgaactcctgcctcaggaccaatggcaagaagagaagagtctagctattgcttgtgaa
gaggatgaggatgaggatgatggtgttcatctagctccgaatagcgctgatgatgcacct
agaactgttccccagcaaagttctactggagaagtaaataccacaccgagtcgcccttct
ggtcgtgttgttggcattatcaagagaaattggcattcgtattgtggatctttggaccca
atgcctatgcctgcaggaagtggcggtgttgctcatgccttatttgtctccaaagatcgc
agaattcccaagattcgaatacaaacccgccagcttgagaaccttcttgataagagaatt
attgtggctgttgattcttgggatcgtcaatctcgatatccatcaggccattatgtacga
actataggagagataggtgatagagatactgaaagtgaggtcgttttgatagaaaatgac
ataaattcaaggccattctcttcacaagttctagcatgtttgccaccattgccatggtca
gtatctgctgaagatctgtccaatccaatcaggcaggatttgcgtggactgtgtgtcttc
agtgtagaccctccaggttgcaaggatattgatgatgcactccactgtacatctcttcca
aatggaaattttgaagttggagttcatattgccgatgtgacaaattttgtgcatcctggt
actccacttgatgaagaggcttcacaaaggggaacatctgtctacctagttgagagacgg
atagacatgcttccaaagcctctcactgaagatatatgttctcttcgatctgatgtggaa
aggcttgcattctctgtcatatgggaaatgacacctgaagcagacattgtttccagcaga
ttcacaaaaagtgtcattaaatcttctgcggcgttgtcttatgtcgaagctcaagcaagg
atggatgatagtcgtttgatggatccaataactacaaatttgaggaatatgaatagttta
gctaagaaaatgagattaaggcgtattgagagaggagctttgactcttgcatctgctgaa
gtcaaatttcaaattgacacagaaactcatgacccccttgatattggtatgtaccagatt
cgggaagccaaccaaatggtggaggagtttatgcttgctgctaatgtttcagttgcagaa
caaattcttaaaagttttcctctatgctcattattaaggcgccatccaacaccaactaga
gagatgcttgagcctttgctacgtactgctgctgcagttggcctgcacttggacgtctca
tcctcaaaagcattggctgattctcttgaccactctgtgggtgatgatccttacttcaac
aagttaatccgcattctagcaactagatgcatgagtcaggctgtttatttcagtagtggg
gatcttacccctccagaatatcatcattatgggcttgcagctcctttatatactcatttc
acatcaccaataagaagatatgctgatgtaattgtgcataggttacttgctgcatcttta
ggaatatccaagttaccacctgtatttcaagacaggcttcagctcactagtatttcagac
aatttaaattatcggcataggaatgcacagatggctgggcgagcctctgtagagctccat
accctaatttacttccggaataggccgacagatacagaagctagggtggtgaaaatgaga
tcaaatggattctttgtgtttgttcccaaatatggcatagaagggcctatatatttgaca
caaaaaggtgagaagggaagtggagaatggtatgtcgacgagcaacaacagaaaatcaaa
aagatggatggtagcatttcatacagcattttgcagaccgtccaaattcatatggaggtc
gtggagccgcagcctaaccgaccaaaacttcagcttactcttctatga
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