KEGG   Arachis hypogaea (peanut): 112783063
Entry
112783063         CDS       T07294                                 
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
ahf  Arachis hypogaea (peanut)
Pathway
ahf03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ahf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    112783063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ahf04121]
    112783063
   03036 Chromosome and associated proteins [BR:ahf03036]
    112783063
Ubiquitin system [BR:ahf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     112783063
Chromosome and associated proteins [BR:ahf03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     112783063
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EIPR1 WD40_Gbeta WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_WDR41 ANAPC4_WD40 Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st MIOS_WD40 EIF3I Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_Vps41
Other DBs
NCBI-GeneID: 112783063
NCBI-ProteinID: XP_025681603
LinkDB
Position
20:complement(95186706..95188961)
AA seq 343 aa
MDNSSQESQLRSDNSATYDSTYPLYAMALSSSSTSSNHQRIAVGSFIEEYTNRVDILSFN
PETLTLRPNPSLSFDHPYPPTKLMFHPSTPSSLLRHSAVDLLATSGDYLRLWEVRESSVE
ALSLFNNSKTSEFCAPLTSFDWNDIDPKRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEV
YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
LMDSNKVVILDIRSPTMPVAELERHRGSVSAIAWAPQSSRHICSAGDDAQALIWELPTVA
GPNGIDPMSVYSAASEINQLQWSVAQPDWIAIAFANKMQLLRV
NT seq 1032 nt   +upstreamnt  +downstreamnt
atggacaactcttcccaagaatcccagctccgatccgataactccgctacctatgactcc
acttatcctctgtacgccatggccctctcctcctcttccacttcttccaaccaccaacgc
atcgccgtcggaagcttcatcgaagaatacacaaaccgcgttgacatcctctccttcaac
cccgaaaccctaaccctaaggcccaacccttctctctccttcgaccacccttaccctccc
acaaagctcatgttccacccctccaccccttcctcccttctccgccactccgccgtcgac
ctcctcgccacctccggtgactacctccgcctctgggaggtccgcgaatcctccgtcgag
gccctttccctcttcaacaacagcaagaccagcgagttttgcgcccctctcacctccttc
gattggaacgacatcgatcccaaacgcatcggaacctcaagcatcgacaccacctgcaca
atctgggacatcgaaaagggcgtcgttgaaacgcagctcattgcgcacgataaagaggtt
tacgacattgcttggggtgaagcccgtgtcttcgcttcggtttccgctgatggatctgtt
cgaatcttcgatttgagggataaggagcactccacaatcatctacgagagcccccagccc
gatacgccattgctgcgtttggcgtggaacaagcaggatttgaggtacatggcgaccatc
ttgatggacagtaataaagttgtgatattggatattaggtctccgacgatgccagtggcg
gagttagagaggcaccgtgggagtgtgagtgcaattgcttgggctccgcagagttctagg
cacatttgttctgctggggatgatgctcaggctctgatttgggaattgcctactgtggct
ggacctaatgggattgatccaatgtctgtgtattctgctgcttctgagattaatcaattg
cagtggtccgtggcgcagcccgattggatcgccattgcttttgccaacaagatgcagctt
ttgagggtttga

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