KEGG   Arachis hypogaea (peanut): 112783097
Entry
112783097         CDS       T07294                                 
Name
(RefSeq) general transcription factor IIH subunit 2
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
ahf  Arachis hypogaea (peanut)
Pathway
ahf03022  Basal transcription factors
ahf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ahf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    112783097
  09124 Replication and repair
   03420 Nucleotide excision repair
    112783097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ahf03021]
    112783097
   03400 DNA repair and recombination proteins [BR:ahf03400]
    112783097
Transcription machinery [BR:ahf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     112783097
DNA repair and recombination proteins [BR:ahf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     112783097
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 Zn_ribbon_GTF2H2 IBR VWA VWA_3 UBA_7
Other DBs
NCBI-GeneID: 112783097
NCBI-ProteinID: XP_025681650
LinkDB
Position
20:138585955..138591975
AA seq 422 aa
MNNTVKRPLNGGVEDDDEDEADGADLEAWERTYAEDRSWESLQEDESGLLRPIDTTAIHH
AQYRRRLRALASTAATARIQKGLIRYLYIVVDLSKAASETDLKPSRMAVIGRQVEAFIRE
FFDQNPLSHIGLVTIKDGIAHCLTELGGSPESHIKALMGKLECSGDASLQNALELVLGYL
NQIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFICKHLSQETG
GTYSVALDESHLKELVLEHAPPPPAIAEYATANLIKMGFPQRAAESAVAICTCHEEARTG
GGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSQTSQNGSSHNF
SSDCFGCQQSLLSQGNKPGLSVTCPKCKQQFCLDCDIYIHESLHNCPGCESFRHSNSVTT
AQ
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaataatactgttaaaagaccacttaacggaggggtagaagacgatgatgaggatgaa
gctgatggtgcagaccttgaagcctgggagagaacttatgcagaagatagatcatgggag
tctttgcaagaggatgaatctggacttcttcgccccatagatactacagccattcaccat
gcccagtatcgcagacggcttcgtgcccttgcttccacagcagctactgctcgaattcag
aagggtcttatccgttacctatacattgttgttgacctgtccaaggcagcttcggagaca
gatttaaaaccaagtaggatggctgtgattggaagacaggttgaggcatttatcagggag
ttctttgatcagaatccacttagtcatattggtctggtgaccataaaagatgggattgca
cattgtttaacagaacttggaggcagtcctgagtcccacattaaagctttgatgggtaaa
ctggaatgctcaggtgatgcttccctgcaaaacgcactagagcttgttcttggctatcta
aaccaaattccatcatatggccatcgagaagttctgatcttatattcagctcttagtacg
tgtgatcctggtgacctcatggaaaccatccagaaatgcaaaaagagtaaaataaggtgt
tctgtcattggccttgctgctgaaatgttcatatgcaaacatctcagccaagaaactgga
ggaacttactctgttgcactagatgagtcccacctgaaagagttagttctggagcatgct
ccaccacctccagcaatagcagagtatgctactgctaatctaattaagatgggttttcca
caaagagccgccgagagtgctgttgctatttgtacatgtcatgaagaggctaggacagga
ggaggttacacttgtccaagatgcaaagttcgtgtttgtgagctaccaactgaatgtcgc
atctgtggattgacgcttatctcttcaccccatttggcaaggtcatatcatcatcttttt
ccaatagtgccatttgatgaggtctctcaaacatctcaaaatggtagtagtcacaatttt
tccagtgattgttttggctgtcaacaaagtcttctaagtcagggaaacaagccaggactt
tctgttacttgcccaaaatgcaagcaacaattttgcctcgattgtgatatttacattcac
gagagcttacataactgcccaggctgtgagagtttcaggcattctaattcagtaaccact
gcacagtga

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