Arachis hypogaea (peanut): 112784904
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Entry
112784904 CDS
T07294
Name
(RefSeq) cleavage stimulation factor subunit 77 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112784904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112784904
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
112784904
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
TPR_16
TPR_CcmH_CycH
ANAPC16
TPR_2
Motif
Other DBs
NCBI-GeneID:
112784904
NCBI-ProteinID:
XP_025684044
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Position
20:complement(140628037..140641292)
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AA seq
739 aa
AA seq
DB search
MEKPSGGADKYNVEAAEILANEAQHLPIAEATPIYEQLLLLFPTSAKFWRQYVEAHMAVN
NDEAIKQIFSRCLLNCLQIPLWRCYIRFIRKVNDKKGMEGQEETRKAFDFMLNYVGADIA
SGPVWMEYISFLKSLPAINAQEESHRMTAVRKVYQKAIVTPTHHIEQLWKDYENFENSVS
RQLAKGLISEYQPKYNSARAVYRERKKYVDEIDWNMLAVPPSGSCKEEMQWIAWKKLLSF
EKGNPQRIDAASSNKRVIFTYEQCLMYMYHYPDVWYDYATWHAKGGSIDTAIKVFQRSLK
ALPDSEMLRYAYAELEESRGAIQAAKKIYESILGDGVNATSLAHIQFIRFLRRTEGVEAA
RKYFLDARKSPSCTYHVYVAYATMAFCLDKDPKMAHNVFEAGLKRFMHEPVYILEYADFL
TRLNDDQNIRALFERALSTLKPEESVEIWKKFTQFEQTYGDLASMLKVEQRRKEALFGAG
EDGTAALESNLQDVVSRYSYMDLWPCTSNDLDHLSRQEWLSKSLNNKLEKSALPNGMARL
DKASMQSVSSTPTKVVYPDTSKMVVYDPKHNPAAGAGTNAFDEILKAAPPALVAFLANLP
AVEGPTPNVDIVLSICLQSDQLPGQSGKAGNPTPLQSGKAGIPAQLPSGPATSELSGSSK
PHPVPSGLSLKPTSNRNYGKRKEFDRQEDDDTTTVQSQPLPRDAFRIRQYQKARASSTSQ
TGSVSYGSAFSGDLSGSTG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacccagtggaggtgctgataagtacaatgttgaagccgcggaaattttggca
aacgaggcccagcatttgcctattgcggaggccacacccatatacgagcagcttctactg
ttgtttccaacatctgctaagttttggaggcagtatgtggaggcacatatggctgtaaat
aatgacgaagctatcaagcaaattttcagtcggtgtttgttgaattgccttcagattcct
ctctggcgctgttacattagattcattagaaaggtcaatgacaagaaaggcatggaaggt
caagaagaaacaagaaaagcatttgattttatgctaaattatgttggagctgacatagca
tctggccctgtgtggatggagtatatatcttttcttaagtccttgccggctataaatgct
caagaagaatcacatcggatgactgctgtgaggaaagtctatcagaaagctattgtcact
cctacccatcacattgaacaactttggaaagattatgaaaattttgaaaattctgttagc
cgtcagttggctaaaggtctgatatctgaatatcaaccaaaatacaatagtgccagagca
gtttacagagagcggaagaagtatgttgatgaaattgattggaatatgcttgctgtacca
ccaagtggatcatgcaaggaagaaatgcagtggatcgcatggaagaagctgttatccttt
gaaaaaggaaatccacagagaatagatgctgcatcctccaacaaacgagttatatttact
tatgagcagtgtctgatgtatatgtaccattatcctgatgtatggtatgactatgctact
tggcatgcaaaaggtggttcaatagacactgcaatcaaagtatttcagagatcactgaag
gctcttcctgattcagaaatgctacgatatgcctacgcggagttggaggagtcacgtgga
gcaattcaggcagcaaagaaaatctatgaaagcattttgggagatggtgtaaatgcaaca
tcgcttgcacatattcaattcattcgttttctacgaagaaccgaaggtgttgaagcagcc
cggaagtactttctggatgcacgcaaatctccaagttgcacatatcatgtttatgttgct
tatgctacaatggccttttgtcttgacaaagatccaaagatggcacataatgtttttgaa
gctggactaaaacgctttatgcatgagcctgtttacattcttgaatatgctgatttcttg
acacgtttgaatgatgaccaaaatatacgagctttatttgagagggcattaagtacactt
aaacctgaggaatcggttgagatttggaaaaagttcactcagtttgagcaaacttacggg
gatcttgctagcatgctcaaggttgagcaaagaagaaaagaagcactttttggagcaggt
gaagatggaacagcagcattagagagtaatttgcaagatgttgtgtcacgatacagttac
atggatctgtggccgtgcacctctaatgatcttgatcatttatctcggcaagagtggctt
tccaaaagtttaaataacaaattggagaagtctgctctacctaatggaatggctcgttta
gataaagcatctatgcaaagcgtctcatctaccccaacaaaggttgtttatcctgatact
tcaaagatggtagtatatgatccgaaacataatcctgcagcaggtgctggaacaaatgca
tttgatgaaattctgaaagctgcaccccctgctttggttgcattcttagctaacctacct
gctgttgagggcccgacgccaaatgtggatattgtgctctcaatttgcttgcagagtgac
cagttaccaggacaaagtggaaaagctgggaatccaacaccattgcaaagtggtaaagca
gggattccagcacaattgccatctggtcctgctacaagcgaactttctggttcaagcaag
cctcacccagttccaagtggcttatctttgaaaccaaccagtaaccgaaattatgggaag
cggaaagaatttgacagacaagaggatgatgataccacgactgtccagagccagccatta
cctcgagatgcttttcggatacgacagtatcagaaagcccgagctagcagtacttcacaa
acaggatcggtttcatatggaagtgcgttttctggcgatttatccggtagcactggttga
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