Arachis hypogaea (peanut): 112785238
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Entry
112785238 CDS
T07294
Name
(RefSeq) flowering time control protein FY isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112785238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112785238
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112785238
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_2nd
WDR55
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_Vps41
NBCH_WD40
WD40_RFWD3
Beta-prop_HPS5
WD40_like
Tricorn_2nd
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
112785238
NCBI-ProteinID:
XP_025684473
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All DBs
Position
20:complement(142265237..142274195)
Genome browser
AA seq
677 aa
AA seq
DB search
MMRQPSAGSSTEFHHPAPGGPPPHYDGHGDSHGAKRIRKLTQRKAVDYTSTVVRYMQVRM
WQRDSRDRTVLQPTPAAAIDMLPAAGYPDNPSTSFAAKFVHTSLNKNRCPINRVVWTPTG
RRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNN
MNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSV
DWHPTKSLLVSGGKDQLVKLWDAKTGRELCSFHGHKSTVLCVKWNQNGNWVLTASKDQII
KLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSYDGAIFHWLVGHDTPQIEIPNA
HDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDTGRDRFNMGMQGYAEQTPVAGRVG
GNFPVPEGPTTPGPFAPGLTRNEGTIPGVGVAMPLAIPSLDTPQGDQQSHPVSMGAPPLP
PGPHPSLLASNQQQPYQQNPQQMPQHQHQGMPHQMGPIPMHPNMPQLQHPSHSPMLPHPH
MPRPPSQMPPLGMAGSMPMISSVPPSHPKPMSGPMGMQGAMNQMGPPMPQGPYVGMNQMH
SGSMPNSGGPPIGGFPGNMPNMQAPSNAGYGQGGSFNRPQGGQMPMMQGYNPYQSGNQSG
LPPNAQPGHGSHTQMPQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtcagccttctgctggttcctccactgaatttcaccaccccgctcccggaggc
cctcctcctcactacgacggtcatggcgatagtcacggtgcaaaaaggataagaaagctt
actcaacggaaagcagttgattacacaagcaccgtcgtgcggtatatgcaggttcgaatg
tggcagagggattcgagggataggacggtattgcaacctaccccagccgcagcaattgat
atgttgccagctgctgggtacccggacaatccatctaccagctttgctgccaagtttgtt
catacctctttaaataaaaatcgatgtccaattaacagggttgtgtggactccaacgggt
cggcgtcttatcacaggttctcagactggtgaatttaccctctggaatggacaatctttt
aattttgaaatgattcttcaggctcacgaccaagcaattagatccatggtttggagtcac
aatgacaactggatggtctcgggtgatgatggtggtgcaataaaatattggcagaacaac
atgaataatgttaaagccaacaaatctgctcataaggaatcagtccgtgacttaagtttc
tgtagaacagatttaaagttctgttcgtgctctgatgataccacagttaaagtatgggat
tttgcaagatgtcaagaagagcgttctttaactggccatggttgggatgttaagagtgtt
gactggcatcctacaaaatctctattagtatcaggtggcaaggaccagcttgtaaaactc
tgggatgctaaaacaggaagagagctttgctcatttcacggccataaaagtactgtactc
tgtgtcaaatggaatcaaaatggcaactgggtgctgacagcctcaaaggatcaaataata
aagctttatgacataagggctatgaaggagcttgaatctttccgtggacatcggaaggat
gtaactgctttggcgtggcatccgtttcatgaagagtactttgtcagtggaagttacgat
ggtgcaatattccattggcttgttgggcatgatacaccgcaaattgaaattccaaatgct
catgataataatgtgtgggaccttgcatggcatcctatcggatatcttctctgcagtggt
agcagtgatcacacaacaaagttttggtgtcggaataggccaggagacactggtcgtgat
agatttaacatgggtatgcaaggatatgctgagcaaactcctgtagctggtcgagttggt
ggtaattttcctgtacctgagggtccaacaaccccaggaccatttgcccctgggttgact
cgaaatgagggtacaattccaggtgttggagttgcaatgcccctggccattccttcgctt
gatacacctcagggagaccagcaatctcatccagtatcaatgggtgcccctcctcttccc
ccaggtccacatccttctcttcttgcgtccaatcaacagcaaccgtaccagcagaatcct
cagcagatgccacaacatcaacaccagggaatgccacatcagatgggtccaattcctatg
catccaaatatgccacagctacaacatccttcccattcacccatgctccctcatccacat
atgcctcgccccccaagccaaatgccccctcttggaatggccggatccatgccaatgatt
tcttcggtgcctccatctcatccaaagccaatgtcaggtcctatggggatgcaaggtgca
atgaatcagatggggcctcctatgccacaaggtccctatgttggcatgaatcaaatgcat
tcaggatccatgcccaatagtggagggcctcctattggaggctttccaggcaacatgcct
aacatgcaggcaccatcaaatgctggttatggtcaaggtggttcattcaaccgacctcaa
ggtggacaaatgccaatgatgcaagggtataatccttaccagtctggaaatcaatctggg
cttcctccaaacgcacaacctggtcatggctcacacactcaaatgcctcaatag
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