Arachis hypogaea (peanut): 112790536
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Entry
112790536 CDS
T07294
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112790536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112790536
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112790536
mRNA degradation factors
5'-3' decay
Lsm complex
112790536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
112790536
NCBI-ProteinID:
XP_025688767
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All DBs
Position
3:50057618..50064803
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AA seq
128 aa
AA seq
DB search
MSWPAPDDVLLSTSLATYLDKKLLVLLRDGRKLLGLLRSLDQFANVVLEGACERLIVGDL
YCDVPLGLYVIRGENVVLIGELDLGKEELPQHMTCVSEAEIRKAQKAERDATDLKGTMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggcctgctccagatgacgtcttgctctctacctcccttgccacgtaccttgac
aaaaaacttcttgttctcttgagagatggtcgaaaacttttggggttattgcgctcttta
gatcaatttgctaatgttgttcttgaaggtgcatgtgagcgattgattgttggtgatctt
tattgtgatgtccctttaggcttatatgtgattcgtggagaaaatgttgtcttaattgga
gagctggatttgggtaaggaggagcttccacaacatatgacttgtgtgtcagaggctgaa
atacgaaaggctcaaaaggcagaaagggatgctaccgatctaaagggcaccatgaggaaa
aggatggagttccttgattttgattaa
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