Arachis hypogaea (peanut): 112792070
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Entry
112792070 CDS
T07294
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112792070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112792070
03012 Translation factors [BR:
ahf03012
]
112792070
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112792070
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112792070
Translation factors [BR:
ahf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112792070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
AAA_22
T2SSE
nSTAND3
AAA_19
ATPase
Dicer_dimer
Myosin_head
Motif
Other DBs
NCBI-GeneID:
112792070
NCBI-ProteinID:
XP_025690939
LinkDB
All DBs
Position
13:138769304..138778318
Genome browser
AA seq
1199 aa
AA seq
DB search
MLQSYFRFRLTTTTAMSLRPLRPLRPSLPSATSHLIGLRAFHLRPTIASHLRLHPCSAAP
TGAVELEWNDRQRFKQRTVALPFWRQRNSNYGRFAYQDFSSDDESDVELASPRSPAQQQM
GESTLENIDEWRWKLTMLLRNNEEQEVVSREKKDRRDYEQLSALATRMDLYSRQYARVVV
FSKAPLPNYRPDLDDKRPQREVILPFGIHREVDTHLRAHLSQKPTKRLGSFDDTLHRSSD
AGSIHTNDGIYEKPVPRIHNSVVKEKILQRRSLELRNKQEDWQGSPEGQRMLEFRRSLPA
FKEKDAFLKVISNNQVIVVSGETGCGKTTQLPQYILESEIEAGRGAGCNIICTQPRRISA
MSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLLVDRTLNGVTHVV
VDEIHERGMNEDFLLIVLKELLPRRPDLRLILMSATLNAELFSSYFDGAPTMHIPGFTYP
VRARFLEDILEMTGYRLNPYNQIDDYGQEKTWKMQKQALAFRKRKSQIASAVEDALEVAD
FHGYSLRTRESLSCWCPDSLGFNLIEHVLSHIVKNERPGAVLVFMTGWDDINSLKDKLQT
HPLLGDPSRVLLLACHGSMASTEQRLIFENPEGGVRKIVLATNMAETSITINDVVFVVDC
GKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPRCVYDAFADYQLP
ELLRTPLQSLCLQIKSLQLGSISEFLARALQPPEALSVQNAVDYLKIIGALDDNENLTVL
GRKLSMLPVEPKLGKMLILGAIFNCLDPIMTVVAGLSVRDPFVMPADKKDLAESAKAQFS
ARDYSDHLALVRAYEGWKEAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFFYLLKDIGLV
DHNSETYSRWSQEEHLVRAVICAGLFPGVSSVVNKDKSIALKTMEDGQVLLYGNSVNGSV
PKIPYPWLVFNEKVKVNAVFLRDSTGISDSVLLLFGGNISRGGLDGHLKMLGGYLEFFMK
PELANTYLRLKGELEELIQKKLLDPMFDTQSHDELLSAVRLVISEDHCDGRFVFGRRATP
APKVKEATNSKSSAGVEAENFKNQLQSLLNRAGHEVPTYKTRQLKNNQFRSTVIFNGLDF
VGQPCSNKKQAEKSAAAEALLWLKGDMHSSRDVASHMSVLLKKSNKKDKKTSSKRAKWS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgttacagagctacttcagattcagactcacaaccacaaccgccatgtccctcaggcct
ctcaggcctctcaggccctctcttccttccgccacctcccacttaattggcctcagggcc
tttcacctccgccccaccatagcctctcatcttcgtctccacccatgctccgcggcgcca
accggggcggttgagctggaatggaacgacaggcagcgcttcaagcagaggaccgttgct
ctgccgttttggcgtcaacgcaactccaattacggccgttttgcctaccaagacttctcc
agtgatgatgaatccgacgtggaacttgcctctccacgctctccggctcagcaacaaatg
ggagagtcgactcttgaaaacattgatgagtggagatggaagctgaccatgcttctccgc
aataacgaggagcaagaagttgtgtccagggagaaaaaggaccggcgtgattatgagcaa
ctttcagctttagctaccagaatggatctatacagccgacaatatgcaagagttgttgtc
tttagtaaagcacctctgccaaattaccgccctgatttggatgataagcgtccacaaaga
gaggtaatcttaccctttggtattcatagagaagtagatactcatctccgtgcccatctt
tcacaaaagcctaccaaaaggctaggttcttttgatgatactttgcatagatcaagtgac
gctggaagtattcacaccaatgacgggatttatgagaagccagtgcctaggatccataat
tctgttgtcaaggagaaaatccttcagcgaagaagtttggaactgcgtaataagcaagaa
gattggcaggggtctcctgaagggcaaaggatgctcgaatttcgtagaagtcttcctgca
ttcaaagagaaagatgcatttttgaaagtcatttcaaataatcaggtcattgttgtctca
ggtgaaactggttgtggtaagaccacacaacttccccagtacatactagaatctgagatt
gaagctggacgtggtgctggatgtaacataatttgtactcagcctagaagaatatctgct
atgtctgtttctgaaagagttgcagcagaacgtggggagaaattgggagaatctgttggc
tacaaagttcggttggagggtatgaaaggaagggatactcgtcttcttttttgtaccaca
ggtgtattattgaggagactactagtggataggactttaaatggtgtaactcatgttgtt
gttgatgaaattcatgaacgtggaatgaatgaagattttcttttgattgtcctgaaggag
cttcttcctcgccgtcctgatttgagattaattttgatgagtgcaaccttaaatgctgag
cttttctcttcctactttgatggtgctccaactatgcacattcctggttttacatatcca
gtccgagcacgttttctggaggatattctggaaatgactggatatcggttgaatccttat
aatcaaattgatgactatggtcaagaaaaaacatggaaaatgcagaaacaggctctagct
ttccggaaaagaaagagccaaattgcttctgctgttgaggatgcgctagaagttgcagac
ttccatggatatagtctacgcactcgggagtcattgtcctgctggtgccctgactcactt
ggttttaaccttattgaacatgtgctttctcacattgtcaagaatgaaaggccaggtgct
gttttggtttttatgactgggtgggatgacataaactccttgaaggataagctccaaact
catcctttgttaggagatcccagccgtgtcttgcttcttgcatgtcatggatccatggcc
agcactgagcagaggttgatatttgaaaaccctgaaggtggggtgaggaaaattgttctg
gcaactaatatggctgagactagtattaccatcaatgatgttgtctttgtggttgattgt
ggtaaagctaaagagacatcatatgatgcactaaacaacactccttgtttacttccatct
tggatatcaaaagctgctgcccggcagagaagaggaagggctggtcgtgttcaacctggt
gaatgctaccatctatatcccagatgtgtttatgatgcttttgctgattatcaattgccc
gaacttttgagaacacctttgcagtccttatgtttgcaaatcaaaagtttacaacttgga
agcatatctgaattcttagctagagctctccagccaccagaggcgctatcggttcaaaat
gctgttgattatctgaagataattggggccttggatgacaatgaaaatttgacagttcta
gggcgcaagttgtcaatgcttcctgtggagcccaaactcggcaaaatgctcattctgggc
gctatcttcaactgtttggatcccataatgactgttgttgctggtcttagtgtaagggat
ccttttgtgatgccggctgacaagaaggatcttgcagagtctgctaaggcccagttttct
gctcgtgactatagtgatcatcttgcacttgtccgagcttatgagggttggaaagaggct
gaagctcagcaagctggctacgagtactgttggcgaaattttctttcttctcaaacactt
agggccattgactctcttcgaaagcaatttttttacttgcttaaagatattgggttggtt
gatcacaattctgagacctacagtagatggagtcaggaggagcatcttgtccgagctgtc
atctgtgcgggtttgtttcctggagtatcatctgttgtgaacaaagataagtcaatagca
ctgaaaacaatggaggatggccaggttcttctgtatggtaactctgtaaatggtagtgta
cccaagattccatacccatggttggtgtttaatgaaaaggtgaaagtgaatgctgtattc
cttagggattcgactggtatatctgattcagtgctgctcttatttggtgggaatatatcc
agaggtggattggatggtcacctaaaaatgttgggaggttatttggaatttttcatgaaa
cctgaattagctaacacttacttgcggttgaagggggagctggaggaactgatacagaaa
aaacttctggatcccatgttcgatacacaatcgcatgacgagcttctttcagctgttaga
ttggtgatatctgaggaccactgtgatggcagattcgtatttggtcgtcgggccacacct
gcacccaaagtaaaagaggcaacaaactccaaaagtagtgctggagtagaggctgagaat
tttaaaaaccagcttcagtcattacttaacagagctggacatgaagtaccaacttacaaa
acaaggcaactgaagaacaaccaattccgttccactgtcatttttaatggcttggatttt
gttggccagccttgcagcaacaagaaacaagcagaaaaatctgctgctgccgaggctctt
ctatggctgaagggtgatatgcattcttcacgtgatgttgccagccatatgtctgtgctt
ttgaaaaagagcaacaagaaagataagaaaacttcatcaaaacgtgctaaatggagctga
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