Arachis hypogaea (peanut): 112792578
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Entry
112792578 CDS
T07294
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112792578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112792578
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112792578
Spliceosome [BR:
ahf03041
]
Complex C
Other components
Step II factors
112792578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
DEAD
HA2_C
AAA_22
AAA_19
Helicase_RecD
ABC_tran
SLFN-g3_helicase
AAA_16
nSTAND3
AAA_30
ATPase_2
SRP54
FtsK_SpoIIIE
nSTAND1
AAA_29
T2SSE
Flavi_DEAD
PhoH
AAA_23
Motif
Other DBs
NCBI-GeneID:
112792578
NCBI-ProteinID:
XP_025691656
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All DBs
Position
Arahy.03:complement(141740431..141748318)
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AA seq
698 aa
AA seq
DB search
MDSMATLPIVQYEEKIIETVERNPVVVVIGETGSGKSTQLSQMLYRRGYADSARIAITQP
RRVAAVTVARRVAQELGVQLGEEVGYAIRFEDRTSHRTRIKYLTDGVLLRESLVNPELNE
YSVIILDEAHERSLNTDILMGLMKRLAKIRTSNLKVLITSATLDGDKVSNFFRDCPVLTI
PGKLYPVEILYSKERPSSYLESSLKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKV
RSLEEGSCMDAIILPLHGSLPPELQVRVFSPPPPSCRRIIVATNIAETSLTVDGVVYVID
SGYVKQRQYNPSTGMYSLDIVQISKVQANQRAGRAGRTRPGKCYRLYPSQVYNDEFLDVT
VPEIQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAIT
SIGQKMAELPLEPSLSRTLMEANDYGCIPEALTVAAMLSAETTLLPGRSKTEKKRKHPEP
NLPDGFGLGDHIQLLQIFECWDQTDYDIGWCKDNGLQVRGMLFVRDVRKQLSQIMQKIAK
GPLDRRRGESRQDYRNLRKALCVGYANQLAERKMHHNGYRTLGFQGQVVQVHPSSVLKAD
DLGKFPDYVVYHELIATPRPYMRNVCSVEMRWVVPVINKLKTLDVYKLSGGTGPVEEENE
RNIPDLPKKNVEVTAGVDDSESRIQAARERFLARKGKK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggattcgatggcaacacttccaatagtgcaatatgaagaaaagatcattgaaactgtt
gagcgcaatcccgtcgttgttgtcatcggagaaaccggttccggaaagagcacccagctc
tctcagatgctctaccgccgcggctacgccgattccgccagaatcgccatcactcagccc
cgccgtgtcgctgcggtcaccgtcgcaaggcgcgttgcgcaggagcttggcgttcagctt
ggagaggaagttggatatgccattcgattcgaggatagaacttcacaccgcacgcgcata
aaatatcttaccgacggggttctgctccgcgagagtctggtgaatcctgagctgaatgag
tattctgtcatcatattggacgaagctcatgaacggagcttgaacacggatatattgatg
gggctgatgaaacgcttggctaaaattcgtacttccaatctcaaagtcttgatcacatcg
gccactcttgatggtgataaagtttcaaatttctttagggactgtcctgtgttgaccatc
ccaggaaaactgtacccggttgagatactttatagcaaggagcgtccgtcaagctatctt
gagtcttctctgaaaacggctattgatatacatgttcgtgaaccggaaggggatgtcttg
atattcatgactggacaggatgatatagagaaattggtatctaagttagaagataaagtt
cggtctttggaggaaggttcttgcatggatgctataatcctccccctacatggttccttg
ccacctgaattgcaggtgcgtgtatttagtcccccacctccaagctgtaggcgaattatt
gttgcaacaaacattgctgaaacttctttgactgttgacggtgttgtgtatgttattgac
tctgggtatgtaaagcaaaggcagtataatccatctaccggcatgtattctcttgatatt
gttcaaattagcaaagtgcaagcaaatcagcgtgcaggccgagcaggacgaacccgtcct
ggaaaatgctaccgtctgtatccttcccaagtttacaatgatgagttcttggatgttact
gttcccgaaatacagagatcttctcttgctggtagtgttctttacttgaagtcattggac
cttccagatattgacatcctgaaatttgattttcttgatcctccttcatctgagtcctta
caagatgccttgaagcaattatatctgattgatgctattgatgaaaatggtgcaattaca
agtattggacagaaaatggctgagcttccattagaaccttccttatcacgaaccttgatg
gaggcaaatgattatggttgcatacctgaggctttgactgttgctgccatgttatcagct
gaaactacattgctaccagggcggagcaaaactgagaaaaagaggaaacacccagagccc
aaccttcctgatggctttggcttgggtgatcacatacaattgctgcagatatttgagtgc
tgggatcaaactgattatgacattggttggtgcaaagacaatggcttacaggtgcgaggg
atgctgtttgttagagatgtccgtaagcagttatctcagataatgcagaaaatagcaaaa
ggaccactcgataggagaaggggagagtctcgacaggattatcgaaatttgaggaaggct
ctatgtgtgggatatgcaaatcagctggctgaaaggaaaatgcatcacaatggttatcga
actttgggttttcaaggccaagtagtccaggtacatccatcgtctgttctgaaagctgat
gatctggggaagtttccagactatgttgtgtaccatgagctaattgcaactccacgtcca
tacatgagaaatgtatgttctgttgagatgagatgggttgtacctgttattaacaagctt
aagacacttgacgtatacaaactaagtggtggaactggtcctgttgaggaggagaacgag
agaaatataccagatttgccgaaaaaaaatgttgaagttactgctggtgttgatgacagt
gaaagtagaatccaagcggctagagaacgatttcttgctcgtaaaggcaagaaatga
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