Arachis hypogaea (peanut): 112794241
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Entry
112794241 CDS
T07294
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112794241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112794241
03009 Ribosome biogenesis [BR:
ahf03009
]
112794241
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112794241
Spliceosome [BR:
ahf03041
]
Complex A
U1 snRNP components
U1 related factors
112794241
Complex B
112794241
Ribosome biogenesis [BR:
ahf03009
]
Eukaryotic type
Pre-60S particles
Helicases
112794241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
PRAI
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
112794241
NCBI-ProteinID:
XP_025692132
LinkDB
All DBs
Position
1:8194914..8202975
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AA seq
596 aa
AA seq
DB search
MSYVPPHLRNSTTTTTTTTTTTTTAKTSSVTQENNNDNISNNVNHQTKLAFPSYSNSHSH
FHSNGTNGTNGTNGINGNANNHNSVSHGSRRSTATPQPSRIFAAPEPVFPHWQPSERVSR
MSPDQIEEVRLRLNLDVTIASDSPAAPAPIESFSDMCVHPSIMKDIAYHEYTRPTSIQAQ
AMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCMAQPPIRRGDGPLALVLAPTRELAQQI
EKEVKAFSRSLESLKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRI
SFVVLDEADRMLDMGFELQIREIMRNLPEKHQTLLFSATMPVEIEALSKEYLANPVQVKV
GKVSSPTTNVSQTLVKVSENEKIDRLLDLLVEEASQAEKCGHPFPLTIVFVERKTRCDEI
AEALVAQGLSAVSLHGGRSQGEREAALHDFRSSTTNILVATDVASRGLDVTGVSHVINLD
LPKTMEDYVHRIGRTGRAGTTGLSTSFYTDRDMFLVANIRKAIADAESGNTVAFATGKVA
RRKEKEAAAAQKEANIALSKHFGLGPASINIEDKYRFMITTSNIKKVGAADSAWDD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgtgcctccacacctcagaaactcaaccaccacaacaacaaccactaccacc
accaccaccacggcgaaaacctcctccgtaacccaagaaaacaacaacgacaatatcagc
aacaatgttaaccatcaaactaagctcgcattcccttcttattcaaactcacactctcac
tttcactccaacggcaccaatggaaccaatggaaccaatggaatcaatggcaacgccaac
aaccacaattccgtgtcccatggttctcgccgctccaccgccactccgcagccgtcacgg
attttcgcagctcccgagccagttttccctcactggcagccatccgagcgcgtttcacgc
atgagccccgaccagattgaagaggtccgcctccgacttaaccttgatgtcactattgca
tcagactctccagctgctcctgcaccaattgaatcatttagtgatatgtgtgtgcatcca
agtatcatgaaggatattgcatatcatgaatacaccaggccaacttctatccaggcacag
gccatgccaattgctctcagtggaagggatctacttggctgtgctgaaactggtagtggg
aaaactgcagctttcacaattcctatgatacagcattgcatggctcaacctcctattcgg
cgtggtgatggtcctctggcattagttttggctcctactagagaacttgctcaacaaata
gagaaagaggttaaagcttttagcagatctcttgagtcgttgaaaactgccatagttgtg
ggtggaactaacattgaaaagcagaggtctgagctaagagcaggagttgaaattgctgtt
gcaacccctggaagatttattgatcatttacaacaaggcaatacttccctttctagaatt
tcttttgttgttctagatgaagcagatagaatgcttgatatgggttttgagctacagata
cgagagataatgagaaatcttccagagaagcatcaaacactgctgtttagtgccactatg
cctgtggagattgaagcattatcaaaggaatacttggctaatcctgtacaagtgaaagtt
ggaaaagtcagtagcccaacaacaaatgtttcacaaacacttgtgaaggtctctgaaaat
gagaagattgatcgacttctagatttgcttgtagaagaggcgtcacaggctgaaaaatgt
ggtcatccatttccactaacaatagtgtttgttgaaagaaagacgagatgtgacgaaatt
gctgaagcacttgtagctcaaggattatctgcagtttctcttcatggtggccgcagtcaa
ggtgaaagagaggctgccctgcatgattttcggagtagcaccaccaacattttggttgcc
actgatgttgcatctcgtggcttggatgtcacaggagtgtcgcatgtcatcaatctagat
cttccaaagaccatggaagattatgtacatcggattggaaggacagggcgtgcaggaaca
acaggcctatcgacttcattctacactgatcgtgacatgttcctcgttgcaaatataagg
aaagcaattgctgatgctgaatctgggaacacagtggcatttgcaactggaaaggttgct
agaaggaaggagaaagaagcagcagctgcacaaaaagaggcaaatattgctttatccaaa
cactttggattgggacctgcttcaattaacatcgaagataaatatagatttatgattact
acctcaaacattaaaaaggtaggcgcagctgatagtgcttgggatgattag
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