Arachis hypogaea (peanut): 112794714
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Entry
112794714 CDS
T07294
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112794714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112794714
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112794714
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112794714
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
112794714
NCBI-ProteinID:
XP_025692481
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All DBs
Position
4:18321783..18322622
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AA seq
279 aa
AA seq
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MDSSTKPVVVRQVWASNLESEFALLEQILPCYCHVAFDTEFPGFIHVSEKNCHYSKLPPS
YTYKLVKANVDSLKLIQLGLALSNYAGHLPDLGTDSYYVWEFNFKGLDVDRDHHNPDAIQ
LLAEQGIDFAQIKEEGIPIGAFRRLFLRSRFMFSRLNLTWVTFHSTYDFGYMVKVLTGRK
LPNDLDVFKVVVSELFGSSVYDMKHMIKFCRGINVGGLEKLAKSLKVDRVAGNSHQAGSD
SLLTIQTFFKLRDLYFTADNCDEQDCLNINSFVNILFGL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggatagtagcaccaaacccgtggtggttcgtcaagtttgggcatcaaatcttgaatct
gagttcgctctccttgaacagattcttccctgttactgccatgttgcctttgacacagag
ttcccaggattcatccatgtgtcggagaagaactgccactactcaaagcttccaccttcc
tacacttacaaactcgtcaaggccaatgtcgattccctgaaactcattcagttgggtctc
gccctctccaattatgccggccacttacccgaccttggcaccgattcttactatgtctgg
gaattcaatttcaaaggtttggacgtcgatcgcgaccatcataacccggacgcaatccag
ttactcgcagaacaaggaatcgattttgcccagattaaggaagaggggatcccaattggt
gcctttagaagattgtttctgagatcaagattcatgtttagtaggctgaatctgacatgg
gtcactttccatagtacctatgattttgggtacatggttaaggttctcactggaaggaaa
ttgcccaatgatcttgatgttttcaaggttgttgtctccgaattattcgggtctagtgtt
tatgatatgaagcacatgattaagttttgcagaggaatcaatgtcggtgggttagagaag
ttggcgaagagtttgaaggttgatcgtgttgctgggaatagtcatcaagccggttcagat
agtttgttgactattcagacttttttcaaacttagggatctttattttactgctgataat
tgtgatgagcaagattgtttgaacatcaattcctttgtgaatatcttatttggtttataa
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