Arachis hypogaea (peanut): 112795684
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Entry
112795684 CDS
T07294
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03440
Homologous recombination
ahf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112795684
03450 Non-homologous end-joining
112795684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahf03032
]
112795684
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112795684
DNA replication proteins [BR:
ahf03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
112795684
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
112795684
BRCA1-C complex
112795684
NHEJ (non-homologous end-joining)
MRX complex
112795684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
SbcC_Walker_B
Rad50_zn_hook
AAA_29
AAA_16
ABC_tran
AAA_22
Motif
Other DBs
NCBI-GeneID:
112795684
NCBI-ProteinID:
XP_025693560
LinkDB
All DBs
Position
4:complement(2161718..2176179)
Genome browser
AA seq
1316 aa
AA seq
DB search
MSTVDKMLIKGIRSFDPENKNVITFFRPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
NPHNGEKVCLSYRCADMDKEIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI
FSATRYTKALEVIKKLHKEQAQEIKTFKLKLENLQTLKDAAYKLRESIAQDQEKTESLKC
QLQELEGSIKDVDDKIHHAEKTLKDLRKLQDQISTKTAQRSTLFREQQKQYAALTEDNED
TDEELMEWKTKFEERIGILQTKISKLERDLNDIDTKSSFLKQTINDSIWEISKLQTEAEA
HMSLKNERDSCIKNFFAKHNLGPLPESPFTDEVATNLTNRVKSRALDLEKDLQDKKKADD
NKLKMAWDCYMNANDRWKNTEAQKKAKSEIKNGIVRRIEEKENERESLELQISNVNISHI
DERERNLRIDVERKTNQLAEREFEVNIRQKQSEVYSIEQKIKAVNREKDIMVADSEDRVK
LSFKKAELENHKKKHRKIVDDQKDKIKMVLKGRVPADKDLMKEVSQALRTLGSEYDNQNA
SCNEVKMEVTKLETKETEIKNNLLKHKKDLESKKRRIETELQSLDPQWSCIDSYLEMLES
FKEKRDFAISKYKGNEGIQNSLDLFAKEARTKHACPCCDRAFSAEEEDEFVKKQRSRVAN
SAKVIKALAEESAIADSNYQQLDNLRVVYEEYVKLNEETIPDAESKLQQINEELDCKSQE
LDDMLGVLAQIQSDRDVAKALMQHIETADRHFQETIALQKQVEDLEYKLDFRGQGVRTME
EIQLELKSLQGTKDNLHAELEKLREEQRYAENDLSSIQIRWHTLREEKVKAANTLQDAKR
VEEELARLTEEKTKVDLDEKHLAEALRPLSKERDKLLADHDELKVRLNRDSEYLVEQKRI
YQQEAESLFKMTSKIREYSDLKKGDRLKELQEKKSLSESELKSCDARKQAILADVNKSKD
LLRDQDNIKRNIEDHLNYRKTKAEVDELGREIERLEESILKVGGVSAIESELQKLSKERE
TLLSELNRYHGTMSVYQSNISKNKIDLKQSQYKDIDKRYFDQLIQLKTTEMANKDLDRYY
NALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT
GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVSKDDLQHSIIECQEIFD
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgttgataagatgctcatcaaaggcattcggagcttcgaccccgagaacaag
aacgtcatcaccttcttcagacccttaaccctaatcgttggccccaacggtgctggaaaa
accacaatcatcgagtgcttgaagctttcttgcaccggcgagttgcctcctaatgcaagg
tctggtcacagctttattcatgaccccaaggttgctggtgaaactgaaacgaagggccag
attaagctccgatttaagacagcagcgggaaaagacgtggtttgcataaggtcctttcag
ctcacgcaaaaggcgtcgaagatggagtacaaggcaattgagagtgtacttcaaactatt
aatcctcataatggggagaaagtttgccttagctatagatgtgcagacatggataaggaa
attcctgcgctcatgggtgtttctaaggccattttagaaaatgttatatttgttcatcaa
gatgaagcaaattggccactgcaggatccttccacattgaagaaaaagtttgacgacatc
ttttctgcaactcgatatacaaaggcactggaggttataaagaaacttcacaaggaacaa
gcgcaagagataaagactttcaagcttaagcttgagaatcttcaaacattgaaagatgca
gcttataagcttcgtgaaagcattgcccaagatcaggagaaaacagaatctctaaaatgt
cagttacaggagttggaaggaagcattaaagatgtggatgataaaatacatcatgcagag
aaaacactgaaagatttgcgaaagctgcaggaccaaatctcaactaaaactgctcaacga
agcactctgtttagggaacaacagaaacaatatgcagctcttaccgaggataatgaagac
actgatgaagagttgatggaatggaagacaaagtttgaagaaaggattggaattttacaa
acaaaaataagcaaattggagagagacttgaatgacattgacactaaaagttctttcctt
aagcagactatcaatgattccatctgggagatcagcaagcttcaaactgaagctgaagct
cacatgtctttgaagaatgaacgtgattcgtgtattaaaaatttttttgcgaagcataat
ttagggcctcttccagagtcacccttcactgatgaggttgctaccaacctgaccaatcgt
gtaaaatcaagggctttagatcttgagaaggacctccaagataaaaagaaagcagatgac
aataaactcaagatggcatgggactgttacatgaatgccaatgaccgatggaaaaatacc
gaggctcaaaaaaaagctaaatcagagatcaagaatggcattgttagacgcattgaggaa
aaagaaaatgagcgtgagtcactcgaacttcaaatttccaatgtaaacatttctcacatt
gatgaaagagaaagaaatttgcgaatagatgtcgagaggaagacaaaccaactagctgaa
agagaatttgaagtaaatatacgtcaaaagcaaagtgaggtatatagtattgaacaaaag
attaaggctgtcaatcgggagaaggatatcatggttgctgattcagaggacagagtgaag
ctatcttttaagaaagcagagttggagaatcacaagaagaaacatagaaagatagtagat
gaccaaaaggataaaataaaaatggtgctaaaagggagggtccctgctgataaggatctg
atgaaggaagtttctcaagcattaaggactcttggtagtgaatatgataatcaaaatgca
agttgcaatgaggtcaaaatggaagttaccaagttggagacaaaagaaacggaaattaaa
aataatctgctcaaacacaagaaggatttggaatcaaaaaagagacgtattgaaaccgag
cttcagtctttggatcctcagtggtcttgtattgattcttatctcgaaatgttagagtct
tttaaggagaagagagatttcgcaataagcaagtataaaggtaatgaaggtatccaaaac
tcacttgatctttttgcaaaggaagccagaactaagcatgcttgcccttgctgtgaccgc
gccttctctgcagaagaagaagacgagtttgtgaagaagcaaagatcaagggttgctaat
tcagctaaagttattaaagctcttgctgaggagtctgcaattgcagactctaactatcag
cagttggacaaccttcgtgtagtttatgaagaatatgtcaaacttaacgaggagacaatc
cctgatgctgaaagtaaacttcagcaaattaatgaggagctggattgcaaatctcaggaa
ctggatgatatgttaggtgttttagcacaaatacagagtgacagagatgtggccaaagca
ttgatgcaacatattgaaaccgctgaccggcattttcaagaaactattgctttgcagaag
caagtagaggatttagaatataagcttgattttcggggacaaggagtgaggactatggaa
gaaattcaattggagcttaaatcattgcagggaacaaaggacaatttacatgctgaattg
gagaagctgagggaagaacagagatatgcagagaatgatctatcaagtattcaaataagg
tggcacactcttagggaggagaaagtcaaagcagccaacacattgcaagatgctaaaagg
gtagaagaagaattagcacgtctgactgaagaaaagaccaaagttgatcttgatgaaaag
catttagcagaagctcttcgacccttatccaaggagagagataaattacttgctgaccat
gatgaactgaaagttagacttaatcgtgattctgagtacctagttgaacaaaagagaatt
tatcagcaagaagctgaatcactttttaaaatgacttctaaaattagagagtactcagat
ttaaagaaaggggacaggttaaaggaactgcaggaaaagaaatctctatcagagtctgaa
cttaaaagttgtgatgctaggaagcaagcaattttagctgatgttaacaaaagcaaagat
ttgttgcgagatcaagataatataaaaagaaatatcgaggaccacttaaattaccggaaa
acaaaggctgaagtagatgagctaggacgtgaaattgaaagactcgaagaaagtatattg
aaggttggtggtgtgtccgcaattgaaagtgaactacagaaattatcaaaggagagagag
acgcttctttcagagttaaacaggtaccatggaacaatgtctgtttaccaaagcaatatt
tccaaaaataagattgatcttaagcagtctcaatacaaggacatagataagcgatacttt
gatcagcttatacagcttaagacaactgaaatggcaaacaaggacctggacagatactac
aatgcacttgataaagcattgatgcgcttccactcaatgaaaatggaagaaatcaacaaa
attataagggaattgtggcaacaaacctatagaggacaggatatagattacattagtatt
cattcagattctgaaggtgctgggacccgttcctacagttacaaggttctcatgcagact
ggtgatgccgagctagaaatgagaggaagatgtagtgcgggccagaaggtccttgcatct
cttatcattcgcttggcgttagctgaaactttttgcctcaattgtggaatattggcactg
gacgagccaaccacaaatttggatggccccaatgctgaaagtctggctgctgctctccta
aggatcatggaagacaggaaaggccaggaaaattttcagctaatcgtaattactcatgat
gagcgttttgctcaactgattggtcagcgccagcatgcagagaaatattatcgagtctca
aaagatgatcttcagcacagtataattgaatgccaggagatatttgactga
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integrated database retrieval system
