Arachis hypogaea (peanut): 112796519
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Entry
112796519 CDS
T07294
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03013
Nucleocytoplasmic transport
ahf03015
mRNA surveillance pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112796519
09122 Translation
03013 Nucleocytoplasmic transport
112796519
03015 mRNA surveillance pathway
112796519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112796519
03041 Spliceosome [BR:
ahf03041
]
112796519
03009 Ribosome biogenesis [BR:
ahf03009
]
112796519
03012 Translation factors [BR:
ahf03012
]
112796519
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112796519
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112796519
mRNA cycle factors
Stress granule specific factors
112796519
Spliceosome [BR:
ahf03041
]
Complex C
Other components
EJC/TREX
112796519
Ribosome biogenesis [BR:
ahf03009
]
Eukaryotic type
90S particles
Helicases
112796519
Translation factors [BR:
ahf03012
]
Eukaryotic type
Initiation factors
eIF-4
112796519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
TniB
CMS1
Motif
Other DBs
NCBI-GeneID:
112796519
NCBI-ProteinID:
XP_025694786
LinkDB
All DBs
Position
4:complement(23042263..23046759)
Genome browser
AA seq
406 aa
AA seq
DB search
MATTSVVPANRRRAANAAEELEFETTEGVKAIASFEEMGIKDDLLRGIYQYGFEKPSAIQ
QRAVTPIIQGRDVIAQAQSGTGKTSMIALTVCQFVDTSKREVQALILSPTRELASQTEKV
ILAIGDFINIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRDIKMLV
LDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVS
AMHGDMPQRERDAIMAEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRI
GRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacgtcggtggtgccggccaaccggcggcgtgcggcgaacgctgcggaggag
ctggagttcgagacgacggagggggtaaaggcgatagcgagcttcgaggagatgggaata
aaggacgatctgctcagagggatctaccagtacggattcgagaaaccctccgcaatccaa
cagcgtgccgtgacgccaatcatacagggccgtgacgtcatcgctcaggctcaatctgga
accggcaagacctccatgattgcactcaccgtttgccagttcgttgatacctccaagaga
gaagtccaggccttaatattgtctccaacaagggaactggcctcacagactgaaaaggtt
atattggctattggggatttcataaacatacaagcacatgcttgcattgggggtaaaagt
gtgggagaagatataaggaagcttgaatatggagttcacgtggtgtcgggaactcctggt
cgtgtctgtgacatgatcaagaggagaacattgcgtacaagagatataaagatgctagtt
cttgatgaatctgatgaaatgttgagcagagggtttaaagatcagatttatgatgtgtac
agatatctccccccagatcttcaggttgtcttgatttctgctacccttcctcatgaaata
ctggaaatgacaaacaagttcatgacagatcctataaggattcttgtaaaacgtgatgag
ttgacattagagggcatcaagcaattttttgttgccgttgaaagggaagaatggaaattt
gataccctgtgtgatctttatgatacactcactattactcaagctgttatattctgcaac
actaagcgaaaggtggattggttaactgagaaaatgcgtaacaataatttcactgtctca
gcaatgcatggcgacatgccacagagagaaagagatgcaatcatggcagagtttcgctct
ggtacaactcgtgtactaataacaacagatgtttgggctcgtggccttgatgtgcagcag
gtttctctagttatcaactatgaccttccaaataatcgagagctctacattcatcgaatt
ggccgatctggacgatttggacgcaagggtgttgcaataaattttgtcaaaagtgatgac
atcaagatcttgagagatattgagcaatattacagtactcagatagatgaaatgccaatg
aatgttgctgatcttatataa
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