Arachis hypogaea (peanut): 112797430
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Entry
112797430 CDS
T07294
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112797430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112797430
03036 Chromosome and associated proteins [BR:
ahf03036
]
112797430
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112797430
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112797430
mRNA degradation factors
5'-3' decay
Decapping complex
112797430
Chromosome and associated proteins [BR:
ahf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
112797430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
PRP1_N
CMS1
TFIIA
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
112797430
NCBI-ProteinID:
XP_025696129
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All DBs
Position
4:complement(115385058..115390720)
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AA seq
506 aa
AA seq
DB search
MNNNRARYPPGIGLGRGNGGFNTGFQPRPPQQQYVQRHMVQQQHPQHYQHYQQNQQQHQQ
QQQQQQQQQQQWLRRTQLGGGGSNDNNVVEEVEKTVQSEAVDSSSQDWKARLKVPPPDTR
YKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT
GKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSL
KDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQ
FLPPTRQILMFSATFPVTVKDFKDRYLRKPYIINLMDELTLKGITQYYAFVEERQKVHCL
NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC
RNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN
LYRIEQELGTEIKQIPPHIDQAIYCR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaatagagcgcggtacccacctgggatcggattaggtcgtggaaatggtggt
ttcaacactgggtttcaaccaaggccacctcaacaacagtatgtgcaaaggcacatggtt
cagcagcagcatcctcagcactatcagcactatcagcagaatcagcaacaacatcaacag
cagcagcaacaacaacaacaacagcaacaacagtggttgagaaggacccaattgggtggc
ggtggaagtaatgacaataacgttgttgaggaggttgagaagaccgtacagtctgaagcc
gtggactcaagttcacaagattggaaggcaagattaaaggttccaccacctgatacacgc
tataagactgaggatgtaacggcaactaaaggaaatgaattcgaggattactttttgaag
cgtgagctgctcatgggaatatatgagaagggttttgagagaccttcaccaatccaagaa
gaaagcattccaattgctcttactggcagtgacattcttgcaagggctaagaatggaaca
ggcaaaacagctgcattttgtattcctgcattggaaaaaattgatcaagataataatgtt
attcaagttgttatattggtcccaaccagagaattggccttgcagacttctcaagtgtgt
aaagaactcggaaaacatttgaaaattcaggttatggtaaccactggtggtaccagccta
aaagatgacattatgcgtttatatcaaccagttcatttgctggttggaactccaggaaga
attttggatcttgcaaagaagggcgtttgtgttttgaaagattgctctatgctagttatg
gatgaggctgataagcttctgtccccggagttccaaccttcaatagagcagctgattcaa
tttcttcctccaacccgtcaaatcctgatgttttctgcaacatttcctgttactgtaaag
gacttcaaagatagatatcttcgaaagccatatatcattaatcttatggatgagctaact
ctgaagggtatcacacagtattatgcatttgtggaagagagacagaaagtccactgccta
aatactcttttctctaagcttcaaataaaccagtcaatcatcttctgtaattcagtgaat
cgggttgaactccttgccaagaaaataacagaacttggatattcttgtttctatattcat
gcaaagatgttgcaagaccaccgtaacagagtatttcacgatttccgcaatggtgcatgc
aggaatcttgtttgtactgatctttttactagaggtatagacatccaagcagtcaacgtt
gttattaactttgattttccgaagaactcagaaacctatctgcacagggttggtcgttca
ggaaggtttggacaccttggtttagcagtaaacttgattacatatgaggatcgcttcaat
ttatataggattgaacaagagcttggcactgaaataaaacaaattccaccacatattgat
caggctatatattgccggtga
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