Arachis hypogaea (peanut): 112798292
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Entry
112798292 CDS
T07294
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH9-like
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112798292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112798292
03041 Spliceosome [BR:
ahf03041
]
112798292
03009 Ribosome biogenesis [BR:
ahf03009
]
112798292
03016 Transfer RNA biogenesis [BR:
ahf03016
]
112798292
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112798292
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
112798292
Spliceosome [BR:
ahf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
112798292
Complex C
U4/U6.U5 tri-SnRNP related factors
112798292
Ribosome biogenesis [BR:
ahf03009
]
Eukaryotic type
Pre-60S particles
Helicases
112798292
Transfer RNA biogenesis [BR:
ahf03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
112798292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
ResIII
Helicase_C
ATPase_2
nSTAND3
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
112798292
NCBI-ProteinID:
XP_025697340
LinkDB
All DBs
Position
14:complement(143022289..143029674)
Genome browser
AA seq
994 aa
AA seq
DB search
MGSVKRKSAEQEELEIPPSQRQKQQTSNDDSVVEEGCGCVHHVSYPEGYVPNPSGSSNPK
SSEPAKKFPFPLDPFQSQSIACLENNESVMVSAHTSAGKTVVASYAIAMSLRNGQRVIYT
SPIKALSNQKYRDFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAW
IIFDEVHYMRDRERGVVWEESIVMSPKNARFVFLSATVPNAKEFADWVAKVHQQPCHIVY
TDYRPTPLQHYIFPAGGDGLYLVVDEKGKFREDSFQKSLNALVPPNEGDKRKENGKWQKG
LVLGRLGEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLNGVEEKDSIEK
IFWSAMDMLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFAT
ETFSIGLNMPAKTVVFTNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDERGICILMVDEK
MEPSTAKMMVKGAADSLNSAFHLSYNMILNQMRCEDGDPENLLRNSFYQFQADRAIPGLE
KQIKILEEERESIVIEEENSLKDYYDLLDQHRSLNKEVHDIVISPRHCLPFLQPGRLVSL
HCTSCDEDHHPIFSEDKLTWGLVINFERVKSNAEDDATIKAEDASYMVDVLTRCVVTKDK
IGKKSVRIVPLKELGQPLVVSVPISQINTITSLRLYIPKDLLPLEARENTLKKVLETLSR
FGEKGLPLLDPEEDLKIQSSSYKKLSRRIEALERLFEKHEIAKSPLIKQKLKMLHRKQEL
TAKIKSIKKTLRSSSALAFKDELKARKRVLRRLGYATGDNVVELKGKVACEISSADELTL
TELMFNGVLKDIKVEEMISLLSCFVWQEKIQDAAKPREELDLLFVQLQDTARRVAQLQLE
CKVQIDVESFVKSFRPDIMEAVYAWAKGSKFFEIMEITQVFEGSLIRAIRRLEEVLQQLI
EAAKSIGETQLEAKFEEAVSKIKRDIVFAASLYL
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgggttctgtgaagaggaagtctgcagaacaagaagagctggaaattcctccttctcag
aggcagaagcagcaaacctcaaacgacgattccgtcgtcgaagagggatgcggctgcgtc
caccacgtgtcctatccggaaggttatgttcccaatcccagtggcagcagcaacccaaag
tcgtcggagccagctaagaagttcccgttccctctcgaccccttccagtcccaatccatt
gcttgcctcgaaaacaatgaatccgtcatggtatctgctcatacatctgccgggaaaaca
gtggtggcctcatacgccattgccatgtctctgcgcaatggacagcgcgttatctacact
tcccctatcaaggcccttagcaatcagaagtacagggacttcaaagaagagttctccgat
gtcggccttatgaccggtgatgtcaccatcgatcccaatgcttcctgcttggtcatgacc
accgaaatatggcgcagcatgcagtacaagggctctgaggtcaccagggaagttgcctgg
atcatattcgatgaggtccactacatgcgcgatcgtgaaaggggtgtcgtttgggaagag
agcattgttatgtcccccaagaacgctcgttttgtattcctatctgccaccgtgcccaat
gcaaaggaatttgctgattgggtggcaaaggtgcatcaacagccttgtcatattgtttat
actgattaccgaccaactccactccagcattatatttttcccgcgggaggtgatggccta
tatttggttgtagacgaaaaggggaaattccgcgaagacagcttccagaaatcactgaat
gctcttgttcctcctaatgagggtgataagagaaaagaaaacggcaagtggcaaaagggt
ttggtgctgggaagactcggtgaagaaagtgacatattcaagatggtgaaaatgatcatt
cagcgtcaatacgatcctgtgatactgtttagctttagcaagagggagtgtgagtttctt
gcgatgcagatggcaaaaatggatcttaatggagttgaggagaaggatagcatagaaaaa
atattttggagtgccatggatatgctttcagacgatgataagaaattaccgcaggtttca
aacatgctaccgttgctgaaacgtggaataggagtgcatcattctggcttacttccaatt
ctaaaggaagtgattgagattttatttcaagaaggactaataaagtgtttgtttgcaaca
gagaccttcagcattggtttgaacatgcctgcaaaaactgttgtttttaccaatgtccga
aaatttgacggggataagtttaggtggttgtctagtggagaatatattcagatgagtggc
cgagctggtcgacgaggtattgatgaacgtggaatatgtatcctcatggttgatgagaaa
atggaaccttcaactgctaaaatgatggttaaaggggcagctgatagtttgaacagtgcc
tttcatttgagctataacatgattttgaatcaaatgcgctgtgaagatggtgatccagaa
aatttgctccgaaattccttttatcagttccaagctgatcgtgccattcctggtcttgag
aaacaaataaagattcttgaggaagagagggaatcaattgttattgaggaggaaaatagt
ttaaaggattattacgatctgctggatcagcacagaagcttgaataaggaggttcatgac
attgtaatatctccaaggcactgcttaccatttttacagcctgggaggcttgtttcactt
cattgtacttcatgtgatgaagatcatcacccaattttttcggaggacaagttgacttgg
ggattggtgattaattttgaaagagttaaaagtaatgctgaagatgatgcaaccataaag
gcagaagatgcgtcttacatggttgatgtccttacaagatgtgtggttacaaaagataag
attggcaaaaagtctgttaggattgttcctcttaaagaacttggacaacctctggtggtt
tcagttcctatctctcagattaatacgataaccagtcttcgtctatatataccaaaggat
cttttgccattggaagctcgagaaaacacactaaagaaagtgttggaaactctttccaga
tttggtgagaaaggtttgcctcttctagatccggaagaagacttgaagatccagagtagc
tcgtacaaaaagttatcccgtaggatagaggctttggagagactatttgaaaagcatgaa
attgcaaagtcaccacttataaagcagaagttaaaaatgttgcacaggaagcaagaattg
actgcaaagataaagtccattaaaaaaacattaagatcttctagtgctttggccttcaag
gatgaacttaaggcaaggaagagggtccttcgcaggctaggatatgctacaggtgataat
gtggtcgaattgaaaggaaaggttgcctgtgaaattagtagtgcagatgaattaacctta
acagagctcatgttcaatggtgtcttaaaggacataaaggtggaggagatgatttctctc
ctgtcatgttttgtctggcaagaaaaaattcaagatgctgccaaaccccgggaagaactt
gatctgctttttgtacaattgcaagacactgctcggagagttgcccaacttcagctcgag
tgcaaggtgcaaattgatgttgagagttttgtgaagtcatttaggccggatattatggag
gctgtgtatgcttgggcaaaaggttcaaagttctttgagatcatggaaattacacaggtt
tttgagggtagcttgattagggcaattagacggcttgaggaagttcttcagcaactaata
gaagccgccaagtccattggggaaactcaactagaggcaaagtttgaagaagctgtttcc
aaaatcaagagggatattgtgtttgcagcatccctgtatctgtaa
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