Arachis hypogaea (peanut): 112800300
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Entry
112800300 CDS
T07294
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03020
RNA polymerase
ahf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112800300
09124 Replication and repair
03420 Nucleotide excision repair
112800300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahf03021
]
112800300
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112800300
Enzymes [BR:
ahf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112800300
Transcription machinery [BR:
ahf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
112800300
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
112800300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
112800300
NCBI-ProteinID:
XP_025698294
LinkDB
All DBs
Position
5:complement(4240766..4248796)
Genome browser
AA seq
1836 aa
AA seq
DB search
MDIRFPYSPAEVAKVRRVQFGIISPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI
DKKLKCETCTAGMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADENDHK
FKQATKIRNPKNKLKKILDACKNKSKCEGGDEIDLAGGHDTDEPVKKSRGGCGAQQPKIT
IDGMKMTAEYKSQRKKSDDQEQLPEPGERKQHLTAERVLGVLKRISDEDCKLLGLDPNYA
RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHII
LEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
TLLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPTPTILKPEPLWTGKQVFNLIIPKQI
NLTRVSSWHNDSERGSITPGDTLVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDA
ARKFLGHTQWLVNYWLLQNAFSMGIGDTIADASTMEVINQTISKAKEEVKQLIRKAQEKN
LDPEPGRTMMDTFENRVNQALNKARDDAGNSAQRSLSESNNLKAMVTAGSKGSFINISQM
TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQ
KLDSLKMKKSEFDRAFKYEFDDENWRPTYMLEEPIEDLKTIREFRNVFEAEVQKLENDRL
QLATEIATTGDSSLPLPVNLRRLIWNAQKMFKVDFRRPSDMHPMEVVEAIDKLQERLKVV
PGEDPLSQEAQKNATLLFNILLRSTFASKRVLEEHRLSREAFEWLVGEIESRFLQSLVAS
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVFL
NPETGKTKERAKGVQCALEYTTLRSVTQATEVWYDPDPQSTIIEEDVDFVKSYFEMPDEE
VPLDKMSPWLLRIELNREMMVDKKLSMADIAEKINLEFDSDLQCIFNDDNAEKLILRIRI
MNDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKPTKVQKFDEIEGFK
THEEWALDTEGVNLLAVMCHEHVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFD
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD
YLRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPISGT
PYHEGLMSPSYLLSPNLRLSPTSDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSP
TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS
YSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYS
PSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNNSGASPDYSPSSP
QYSPSTGYSPSQPGYSPSSTSQYTPQTSDKDDRSTR
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggttcccttattctccggcggaggtcgccaaagtccgaagggttcaattc
ggaattatcagccccgacgagattagacaaatgtctgtggtgcaaattgagcacggcgag
actacggagagggggaaacccaaagttggagggttgagcgaccctcgccttggaaccatt
gataagaagttgaagtgtgagacttgcacggctggtatggccgagtgcccggggcatttc
ggtcacttggagctggctaagccaatgtttcacattggatttatgaagacggttctctcc
ataatgcgttgtgtttgcttcaactgctccaagattttagccgatgagaatgaccataag
tttaaacaggcgacgaagattaggaatccgaaaaataagctgaagaagattttggatgct
tgtaagaacaaaagcaagtgtgaaggtggtgacgagattgaccttgctggtggtcacgac
acagacgagccggttaaaaagagccgtggcggctgtggtgctcagcagcctaagatcacc
atcgatggtatgaagatgactgcagagtacaaatctcaaaggaagaagagtgatgatcag
gagcagcttcctgaacctggggaaaggaagcagcatcttactgcagaaagggttcttggt
gttctaaaaagaataagtgatgaggactgcaaattattgggcttggatcccaattatgcc
cgcccagactggatgattttacaagttctcccaattccacctccacctgtgagaccttct
gttatgatggacacatcctcaaggagtgaggatgatttgacccatcagttggccatgatc
atcaggcacaatgagaatttgaagagacaagagaggaatggatcacctgcccatattata
cttgagtttgcccagttgttgcagttccacatagccacatattttgacaatgagttgcct
gggttgccaagagctacccagagatccggaaggcctatcaaatcaatatgtagcaggctc
aaggcaaaggaaggtcgtattagaggaaacttgatgggaaaaagagttgatttttctgcc
cgaacagtgattacaccagatccaaccattaacatcgatcaattgggggtaccatggagt
atcgctctgaaccttacttatcctgagactgtgactccatataacattgaaaggttgaag
gaacttgttgagtatggaccccatcctccacctggaaaaactggtgctaagtacatcatt
cgtgatgatgggcaaagacttgatctcagatatttgaagaaaagtagtgatcatcatttg
gagcttgggtacaaggtcgagcgtcatttgaatgacggagactttgttctcttcaatcgt
cagcctagtcttcataaaatgtctatcatggggcatagaatcaaaatcatgccttattct
acgttccggcttaatctgtctgtaacttccccttataatgctgattttgatggggatgaa
atgaatatgcatgttcctcagtcatttgaaacaagagcagaggtgttggagcttatgatg
gtgcctaaatgcattgtgtcacctcaatcaaacaggcctgtaatgggaattgtgcaagat
acacttttaggatgcagaaaaatcacaaagagagataccttcatcacaaaggatgttttt
atgaacattttgatgtggtgggaagattttgatgggaaagttccgactcctacaatattg
aagccagagccattgtggactgggaaacaagttttcaatctcatcattcctaaacaaata
aatttaacaagagtttcaagctggcacaatgatagtgaacggggatccataacccctggg
gataccttggtcagaattgagaagggagaattacttactggaactctttgcaaaaagaca
cttggtacatctactggaagtctaattcacgtcatctgggaagaggttggccctgatgca
gctcgtaaatttcttggccatactcagtggcttgtaaactactggcttttgcagaatgcg
tttagcatgggaattggtgatacaattgctgatgcttcgactatggaggttattaaccag
actatatcaaaggctaaggaggaagtgaagcaactcattaggaaggctcaagaaaaaaat
ctggaccctgaacctggtcggacaatgatggatacctttgaaaatagagtgaatcaggca
ctgaataaagctcgagatgatgctggaaacagtgcacaaagaagtttatccgagagcaat
aatctaaaagcaatggtcacagcaggctccaaaggaagttttatcaatatatctcagatg
actgcttgtgtgggacagcagaatgttgaggggaagagaattccatatgggtttatagat
cggacactgccccactttacaaaagatgattatgggcctgaaagtcgtggctttgtggag
aactcatatctccgtggacttacccctcaggagttctttttccatgccatgggaggtcga
gaaggtcttattgatactgcagtgaagacttctgaaactgggtacatccagagacggctt
gtgaaggctatggaggacatcatggttaagtatgatgggacagttaggaactctttggga
gatgttatacaatttctttatggagaagatggtatggatgcagtttggatagaaacacag
aagttggattcactgaaaatgaagaagtcagaatttgatagggcctttaagtatgagttt
gatgatgaaaactggaggcccacttacatgctagaagagcctatagaagacttgaaaacc
atcagagagtttcgcaatgtgtttgaggctgaagttcaaaagcttgaaaatgatagactt
caacttgcaactgagatagccactactggtgacagttctcttccactacctgttaatcta
aggaggcttatctggaatgctcagaagatgttcaaggttgacttccgaaggccttctgat
atgcatccaatggaagtcgtggaagctattgataagctacaagagagacttaaggttgtt
ccaggtgaagatcccttgagtcaagaagctcagaagaatgctaccctcttgttcaatatt
ttgctccgcagcacttttgctagtaaacgtgtcttggaagaacataggctctctcgtgag
gcatttgagtggctagtgggagaaatagaatcaaggttcctgcagtcacttgtagcctct
ggggaaatgattggttgtgtagcagcgcaatcaattggtgagcctgctactcagatgact
ctcaacaccttccactatgctggtgttagtgctaagaacgttacacttggtgttccgagg
ttaagggaaatcattaatgttgcaaagaggatcaaaacaccttctttgtcggtatttttg
aatcccgagactggcaagactaaagaaagggccaagggtgtgcagtgtgctttagaatat
actactcttaggagtgtgactcaggctacagaggtttggtatgatccagacccccagagt
acaataattgaagaagatgttgattttgtgaagtcttactttgaaatgcccgatgaagaa
gttcctcttgataaaatgtcaccttggttgcttcgcatagaactgaatcgtgaaatgatg
gtggataagaagttgagtatggctgacattgctgagaagattaaccttgaatttgattct
gatctgcaatgtatttttaatgatgacaatgctgaaaagcttatacttcgtatccgtatt
atgaatgatgaagctcccaagggagagattcaggatgagtcggctgaagatgatgttttc
ttaaagaaaatagaaagcaacatgctgactgaaatgaccttacgtggcattccagacatc
aacaaagtttttataaaacccaccaaagttcagaaatttgacgagattgaaggttttaaa
actcatgaggaatgggcacttgatacagaaggtgtcaatcttttagctgtgatgtgccat
gagcatgttgatgccaagaggaccacaagcaaccatttgattgaagttatcgaagttctt
ggaattgaggcagtccgaaaagctctgcttgatgaactgcgtgttgtcatttcttttgat
ggttcttatgtgaactacaggcatctggctattctttgtgataccatgacttatcggggg
catttgatggctattacacgtcatggtatcaacaggaatgataccgggccaatgatgaga
tgctcatttgaagagacagttgacattctccttgatgctgcagtatatgccgagactgat
tacttgaggggagtcactgaaaatattatgttaggtcagcttgcccctattggaactgga
gaatgtgctctatatctaaatgatgagatgcttaagaatgctattgagctccagctacct
agctatatggatggtcttgattttggcatgacgcctgctcgttccccaatttctggaact
ccctatcatgaaggcttgatgtctccaagttatttgttgagcccaaatctgcgcctgtca
ccaactagtgatgcacagttttcaccttatgttggtggaatggctttctctcctacttca
tccccggggtacagtccttcatcaccgggatatagtccatcatcacctggatatagccct
acctctcctggctacagcccgacatctcctggctacagccccacctctccaggctacagc
cctacctctcccacgtatagtcctagttctccaggatatagtcctacaagtccagcttat
tctcctactagtccatcatactctcccacttcaccaagctacagcccaacttctccaagc
tacagcccaacttctccaagctatagccccacctcaccaagctacagccccacctcacct
gcctacagcccaacttcacctgcctacagcccaacatcacctgcatacagtcctacttct
ccttcatatagcccaacatcaccttcatatagtcctacttctccttcatatagcccaaca
tcaccttcatacagcccaacatcaccttcatacagtcctacatcacctgcgtacagccct
acctctcctggttatagccccacatcacctagttatagccccacttctcccagttatagt
cctacttctcccagttacaatccacagtctgcaaagtatagtccttccttggcatattct
ccaagtagccctagattgtctccgtcaagcccgtatagtccaacatctccaaactacagc
ccaacatctccatcatattctccaacatctccatcttattctccatcaagcccaacatac
agccccagcagcccatacaataattctggtgcaagcccggactatagcccaagctctcca
caatacagccccagtacgggatactcaccgagtcaacctggttattcaccatcatcaacc
agccaatacaccccacaaacaagtgacaaggatgataggagcactcgctga
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integrated database retrieval system
