Arachis hypogaea (peanut): 112800705
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Entry
112800705 CDS
T07294
Name
(RefSeq) vacuolar sorting protein 39
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112800705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ahf04131
]
112800705
Membrane trafficking [BR:
ahf04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
112800705
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
zf-HC5HC2H
NBAS_11th
zf-HC5HC2H_2
AlaDh_PNT_N
Motif
Other DBs
NCBI-GeneID:
112800705
NCBI-ProteinID:
XP_025698854
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Position
5:10454382..10461029
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AA seq
995 aa
AA seq
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MVHSAYDCVQLVADCPSKIDAVESYGSKLLAACSDGSLRIYSPQCHSQPSDHHSPLHQEP
YALEKTLAGFARRPLISMEVLHSRELLLSLSESIAFHRLPSFETFAVITKAKGANAFDWD
DRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDVVKSMCWCGENICLGIRREYVILNA
TNGALSEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLLPEGRICWSEAPTEVV
IQKPYAAALLPRFVEIRSLRDPYPLIQTVVLRNVRHIRHSNNSVILALDNSIHGLFPVPL
GAQIVQLTASGNFEEALSLCKLLPPEDASLRAAKEGSIHIRYAHYLFENGSYEEAMEHFL
ASQVDITYVLSLYPSIILPKTTIVHEPQKLDIYGDASYLPRGSSGLSDDMEYPSTSHMLE
SDEHVALESKKTSHNMLMALIKYLQKKRNSFIEKATAEGTEEVVLDAVGNNFASYNRFKK
TNKGRGSIPISSGAREMASILDTALLQALLLTGQSSAALELLRGLNYCDLKICEEILQKG
NHHAALLELYKCNSLHREALELLHKLVEESKSSQSEITHRFKPEDIVEYLKPLCGTDPIL
VLEFSMLVLESCPTQTIELFLSGNIPADMVNSYLKQHSPNMQARYLELMLAMNENAISGN
LQSEMVNIYLSEVLDWYTDLCAQQKWDEKVYSPTRKKLLSALESISGYNPETLLKRFPPD
ALYEERAILLGKMNLHELALSLYVHKLNVPEMALSYCDRVYESMHQTSVKYPNNIYLTLM
QIYLNPRRTTASFEDKIINLLSPQNTTTRKVGSATSVKPKGARVTKKIASIEGAEDTKVS
SSSTDSSRSDGDGDEFSEDGSTIMLDKVLDLLGRRWDRINGAHALKLLPRETKLQDLLSF
LGPLVRKSSEMQRNCSVIKSLRQSENLQVKDELYSQRKAAVKISSESMCSLCHKKIGTSV
FAVYPNGSTLVHFVCFRDSQNMKAVAKGSQMRRRL
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacagcgcttacgactgtgtgcagctggttgccgattgcccttccaagatcgat
gccgtcgaatcttacggctccaagctcctcgccgcatgctccgatggatctctccgcatc
tactctccccagtgccactcacaaccctccgatcaccactctcccctccaccaagaacct
tacgcgctcgagaagaccctcgccggtttcgccaggaggcctctcatctccatggaggtc
ctccactccagggagctcctcctctctctctccgaatccatcgccttccaccgcctccct
tccttcgagaccttcgccgtcatcaccaaggccaagggcgccaacgcctttgattgggac
gatcgccgcggcttcctctgcttcgctcgccagaagcgcgtctgcatcttccgacatgac
ggtgggaggggattcgtggaggtgaaggagttcggtgttccggacgtggtgaagtccatg
tgttggtgcggtgagaatatctgtttggggattcgaagagagtatgtcattctcaacgct
acaaacggcgctttatctgaggtcttcacttccggtagacttgcgccaccgctagtagtt
tctctcccttccggagagcttcttctcggaaaggagaatattggggtatttgtggaccag
aatgggaagcttcttccagaaggtaggatttgttggtcggaggcacccacggaggttgta
attcagaagccatatgccgccgctctactgccaagatttgtggagattcgatccctccgt
gatccttatccgctgattcaaacagttgttcttcgaaatgttcgtcatatccgacacagc
aataactctgtcatacttgctttagataattctatacatggcctcttccctgttcctctt
ggagcccagattgtccaattaacagcatccggaaactttgaggaggccttgtcattatgc
aagctccttccacctgaagatgcaagcctgcgtgctgcaaaggaggggtctattcatatt
agatatgcccactatctttttgagaatgggagctatgaggaggcaatggaacattttctg
gcatctcaagtagatataacctatgttctttctctatatccgtccattatccttccaaag
acaactattgttcatgagccacagaagttggacatttatggggatgcttcatatctcccc
agaggttcttcaggcttgtcagatgatatggaatacccatcaacatctcatatgttagaa
tctgatgagcatgtggcacttgaatccaaaaaaacaagccataatatgcttatggcacta
ataaagtatttacagaagaagagaaatagttttatagagaaagcgactgcagagggaacg
gaagaagttgttttagatgcagttgggaataactttgcatcctacaatagatttaagaaa
acaaacaaggggcgtggtagtatacccattagctccggagctcgggagatggcttcaata
ttagacactgctctactccaagcattgcttcttactggacaatcttctgctgctttagag
ttactgagaggtcttaactactgtgatttgaaaatatgtgaagaaattcttcaaaaggga
aatcatcatgctgctttattagaactttacaagtgcaactcattgcaccgggaagcactt
gaacttcttcacaaattggtggaagagtcaaagtctagccagtcagaaattacccatagg
tttaagcctgaggacatcgttgagtatcttaagccactgtgtgggacagaccccatactt
gttctagagttctcgatgcttgttcttgaaagctgtccaacgcaaactattgagctcttt
ctgtccggcaatattccagctgatatggtgaactcgtatttgaagcagcattctccaaac
atgcaagctagatacttggagctcatgcttgcaatgaacgagaatgccatatctggcaat
ttgcaaagtgaaatggtaaacatctatctctcagaggtgcttgattggtacacggattta
tgtgctcaacagaaatgggatgagaaggtttattccccaacaaggaaaaagctgttgtct
gccttagagagtatatctggttacaatccagagactctgctgaaacgttttcccccagat
gcattatatgaagagcgtgcaatattgttgggaaaaatgaacctacatgaactggcatta
tctttgtatgttcataagcttaatgttccagaaatggctttgtcctattgtgatcgggtg
tatgagtctatgcatcagacatcagttaaatatcccaacaacatataccttacgcttatg
caaatctatttgaatcctcggaggacaactgcaagctttgaagacaaaattataaatctg
ttgtcccctcagaataccaccacacgaaaagttggttcagcaacatcagtaaaacctaaa
ggagcccgagtaaccaagaaaattgcttcaatagaaggagcagaggacacaaaagttagt
tcaagcagcaccgacagtagcaggagtgatggggatggggatgaatttagtgaggatggt
tctactatcatgcttgataaggtccttgatttgttgggacgcagatgggacagaataaat
ggagctcatgcccttaaacttttaccaagagagactaaattacaggacttgctttcattt
cttggaccccttgttagaaaatccagtgaaatgcagcgtaattgctcagtcatcaagagc
ctgagacagagtgagaaccttcaggtgaaagatgaactctatagtcagaggaaagcagct
gtgaagataagcagtgaaagcatgtgttctttgtgccacaaaaagatagggactagtgtt
ttcgcagtctacccgaatgggagcactctcgtgcactttgtctgtttcagagattctcaa
aatatgaaagctgtggccaaagggtctcaaatgaggaggcgattatga
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