Arachis hypogaea (peanut): 112802980
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Entry
112802980 CDS
T07294
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03022
Basal transcription factors
ahf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112802980
09124 Replication and repair
03420 Nucleotide excision repair
112802980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahf03021
]
112802980
03036 Chromosome and associated proteins [BR:
ahf03036
]
112802980
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112802980
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
112802980
Transcription machinery [BR:
ahf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
112802980
Chromosome and associated proteins [BR:
ahf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112802980
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
112802980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
ResIII
DEAD
NAMPT_N
SNF2-rel_dom
AAA_11
Motif
Other DBs
NCBI-GeneID:
112802980
NCBI-ProteinID:
XP_025702203
LinkDB
All DBs
Position
5:complement(114359568..114364224)
Genome browser
AA seq
759 aa
AA seq
DB search
MKFQIEDVTVYFPYDNIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV
LSKPHTPLKLLYCTRTVHEMEKTLAELKLLHDYQIRHLGPAAKILALGLSSRKNLCVNQR
VLAAENRDSVDAGCRKLTASWVRALAAENTSVPTCEFFEQYERAGSAAVLPPGVYTLQDL
RIFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID
NVCIEALSVSVRRQTIEGARRNLHRMSQEIDKFKATDAGRLRAEYNRLVEGLALRGDLPA
TDAWLANPALPDDILKEAVPGNIRRAEHFMQVLRRLVQYLEGRLETENVEKEGPVGFVTS
ILNHAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEP
FDERMPHIPDPVLQLCCHDASLAIRPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRS
FTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFV
SYSYMDGIVNTWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAIFFSVA
RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA
AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPSWILSHLHDAHLNLSTDMALHTAREF
LRKMAQPYDKTGGSTGRKTLLSQEDLEKTADGSFVESLF
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagttccaaatagaggacgtaacagtgtacttcccctacgacaacatctacccggag
caatacgcatacatgcttgagctcaagagagcgctcgacgcaaaaggacactgcctcctc
gagatgcccaccggcaccggcaagaccatcgcactcttatcactcatcaccagctacgtc
ctctccaagccccacacgcctctcaagcttctctattgcacgcgcaccgttcatgagatg
gagaagactctagctgaactcaagcttctccatgactaccagattcgccaccttggtccc
gccgctaagattcttgcgcttggattgtcctccaggaagaacctctgtgtcaatcagagg
gttcttgcggcggagaatagggattccgttgatgctggctgccggaaattgaccgccagc
tgggttagggcgcttgccgccgagaacacctccgtgcctacctgcgagttcttcgagcag
tacgagagggctggctctgctgcggtgcttccgcctggtgtttatacattgcaggatctg
agaatatttgggaaggaaaaggggtggtgtccttattttttggcacgacatatggtgcag
tttgccaatgtagtggtgtatagctatcagtatttgcttgatcctaaggtggctggcata
atatctaaggaaatgcagaaagagtcagttgttgtatttgacgaggctcataatattgat
aatgtgtgtattgaagcacttagtgtgagtgtgaggaggcagactattgaaggtgctaga
agaaatctccatagaatgagccaggaaattgacaagttcaaggccactgacgccggtaga
ctccgtgctgaatacaacaggcttgttgagggattagcactaagaggagaccttccagcc
acggatgcttggcttgcaaatccggcactgcctgatgatatactaaaggaagctgtacct
ggaaatatacgccgtgctgaacattttatgcaagttttacgtagattagttcaatatctt
gaaggacgcttggaaactgagaatgtggagaaggaaggccctgtaggctttgttacctcc
attcttaaccatgctggaattgaccagaaaacactgaaattctgttatgaccggctgcat
tcattgatgatgacgttggaaattacagatactgatgagttcctacacatccaaactata
tgtgattttgccacacttgtgggcacatatgctcgtggtttttccatcataattgaacca
tttgatgaaagaatgccgcatattccggatcctgtattgcagctctgttgccatgatgct
tctcttgccataaggccagtgtttgagaggtttcagtcagttgtgattacatcaggcaca
cttagccctatagatctgtatccccggcttctgaatttcaaccctgttgttagtcgaagt
tttacaatgtccttaacaagagattgtatatgccccatggttcttacccgtggcagtgat
cagcttccagtcagtaccaaatttgatatgagaagtgatctgggtgtagtaaggaattat
ggaaggctcctgttggagatggcttcagttgttccagatgggatcgtatgcttctttgtc
agctactcatatatggatgggatagtcaatacctggaatgaaactggaatcctgaaggaa
ataatgcagcataagcttgtcttcatagaaacccaagatgtagtcgaaaccacattagct
cttgacaactatcgcaaggcctgtgattgtggaagaggcgctatatttttttccgttgct
aggggaaaagttgctgaaggtatagattttgatcgtcattatgggagactagtaatcatg
tttggtgttccttttcagtatacattaagcaagattttgcttgcacgcctggaatacctg
cgcgatacttttcaaattaaggaaggagattttcttacttttgatgccttgagacaagct
gctcagtgtgtgggtcgggtaatccgttcaaaggctgattatggaatgatgatttttgca
gacaaaagatatagtcgtcacgacaaacgctccaagttacctagttggatactctctcat
ctacatgatgcccacctaaacttgagcacagacatggctttgcatacggcacgcgagttt
cttaggaaaatggcacaaccttacgacaagaccggtggcagtaccggcaggaagacactg
ttgtctcaagaagacttggagaagacggctgatggaagctttgttgagtcgttgttttga
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