Actinoalloteichus hoggarensis: AHOG_01395
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Entry
AHOG_01395 CDS
T04975
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ahg
Actinoalloteichus hoggarensis
Brite
KEGG Orthology (KO) [BR:
ahg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahg03032
]
AHOG_01395 (topA)
03400 DNA repair and recombination proteins [BR:
ahg03400
]
AHOG_01395 (topA)
Enzymes [BR:
ahg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AHOG_01395 (topA)
DNA replication proteins [BR:
ahg03032
]
Prokaryotic type
DNA Topoisomerases
AHOG_01395 (topA)
DNA repair and recombination proteins [BR:
ahg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AHOG_01395 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ASO17945
UniProt:
A0A221VWQ3
LinkDB
All DBs
Position
303704..306421
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AA seq
905 aa
AA seq
DB search
MIVESPAKARKISSYLGGGFVVESSRGHIRDLPRGAADVPAKYKGQPWARLGVDVDNDFE
PLYIVTPDKKATVAELRDALKDVDELYLATDGDREGEAIAWHLLQALKPKVPVRRMVFHE
ITEPAIRAAAENPRDLDQDLVDAQETRRILDRLYGYEVSPVLWKKVMPKLSAGRVQSVAT
RVVVERERERLRFVSASYWDVAAVLDGGESVTPRTFSARLVAVDGERVATGRDFGSDGRP
KSDGVRVLDEATARGLASALADVSLRVAAVDEKPYTRKPYAPFMTSTLQQEAGRKLRFSA
ERTMRTAQRLYENGYITYMRTDSTTLSETAIAAAMSQATELYGAEYVSSKPRQYTRKVKN
AQEAHEAIRPAGEVFRTPGAVAKELETDEFRLYELIWQRTIASQMADAKGTTMSVRIRGS
AATGEECTFASSGRTITFAGFLKAYVESVDSEAGGEADDAERRLPVLTVDQQVTAAELTP
EGHSTNPPPRYTEASLVKTLEELGIGRPSTYASIISTVQDRGYVWKKGSALVPSWVAFAV
VALLERHFGRLVDYDFTAALEDELDGIAAGRQGRTGWLSGFYFGGDVGPEDSIGRAGGLK
KLVGSSVEQIDAREVNSIPMFADDAGRTVVVRVGRYGPYLERTVAAAEGESGEQQRANLP
DDLPPDELTPEIAEKLFATPMEGRTLGTDPASGHDIVAKEGRYGPYVTELLPEGTKGKPR
TGSLLKSMTVETVSLEEALKLLSLPRVVGVDPDSGEEITAQNGRYGPYLKRGTDSRSLET
EDQMFTVTLEEARKIYAEPKKRGRRTAAATPPLRELGADPATGKPMVVKDGRFGPYVTDG
ETNASLRKGDAVETLSDERAGELLAERRAKGGTTKRTKRKPAAKSAAKSAPKTAPKSSPR
SSTKS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcgagtcgcctgcgaaggcgcgcaagatctcctcctacctcggcggcggattc
gtcgtcgagtcctcgcggggacacatccgggacctgccgcgtggcgcagccgacgtgccc
gccaagtacaagggccagccgtgggcccggctcggcgtggacgtcgacaacgacttcgag
ccgctctacatcgtcacgccggacaagaaggcgacggtggccgagctgcgtgacgcgctc
aaggacgtcgacgagctgtatctcgcgacggacggcgaccgggagggcgaggccatcgcc
tggcaccttctgcaggcgctcaagccgaaggtgccggtccgacgcatggtcttccatgag
atcaccgagcccgcgatcagagcggcggcggagaacccccgcgacctcgatcaagacctg
gtcgacgcccaggagacccggcggatcctcgatcgcctctacggctacgaggtcagcccg
gtgctctggaagaaggtgatgccgaagctgtccgccggtcgggtgcagtcggtggcgacc
cgtgtcgtggtggagcgcgagcgggagcgcctgcggttcgtctcggcgtcgtactgggac
gtcgcggccgtgctggacggcggcgagtcggtcactccgcgcaccttctccgcccgtctg
gtcgccgtcgacggcgagcgggtcgcgaccggacgagacttcggctccgacgggcgaccg
aagtccgacggagtccgggtgctcgacgaggcgaccgcgcgcggcctcgcctcggcgttg
gccgacgtctcgttgcgggtcgccgccgtcgacgagaagccctatacccgtaagccctac
gcacccttcatgacctcgacgctccaacaggaggcgggtcgcaagctgcggttctcggcg
gagcggacgatgcgcaccgcgcagcgcctctacgagaacggctacatcacctatatgcga
accgactccacgacgctgtcggagacggcgatcgcggcggcgatgtcgcaggcgaccgag
ctgtacggcgcggagtacgtctcctcgaagcctcggcagtacacccgcaaggtgaagaac
gcgcaggaggcccacgaggcgatccggcccgcgggcgaggtgttccgcactccgggggcc
gtggccaaggagctggagaccgacgagttccggctgtacgagctgatctggcagcggacc
atcgcctcgcagatggccgatgccaagggcacgaccatgagcgtccgcattcgtggttcc
gcggcgacgggtgaggagtgcaccttcgcgtcctcgggtcgcaccatcaccttcgcgggc
ttcctgaaggcctatgtggagtcggtggactccgaggcgggcggcgaggccgacgacgcc
gagcggcggctgccggtgctcaccgtcgatcagcaggtcaccgcggcggagctcacgccg
gaggggcacagcaccaacccgccgccccgttacacggaggccagcctggtgaagacgctg
gaggagctgggcatcggcaggccctccacgtatgcgtcgatcatcagcaccgtccaggac
cgcgggtacgtctggaagaagggctccgcgttggtgccctcctgggtggcgttcgcggtc
gtcgccctgttggagcggcacttcggcaggctggtggactacgacttcaccgccgcgctc
gaagacgagctcgacggcatcgcggctggtcgtcaggggcgtaccgggtggctgtccggc
ttctacttcgggggtgacgttggaccggaggactcgatcggccgggcgggcgggttgaag
aagctcgtcggctccagtgtcgagcagatcgatgcccgcgaggtcaactcgatcccgatg
ttcgccgacgacgccgggcggacggtggtggtgcgggtcgggcgctacggcccttacctg
gagcggaccgtggcggccgccgagggcgagtccggcgagcagcagcgggccaacctgccg
gacgacctgccgccggacgagttgactcccgagatcgcggagaagctcttcgccaccccg
atggaggggcggacactgggcaccgacccggcgagcgggcacgacatcgtcgcgaaggag
ggccgttacgggccctatgtgaccgagctgctgccggaggggaccaagggcaagccgcgc
accgggtcgctgctgaagtcgatgacggtggagacggtgtcgttggaggaggcgttgaag
ctcctctcgcttccccgggtggtcggcgtcgacccggattcaggcgaggagatcaccgcg
cagaacggccgttacggaccgtatctgaagcggggcaccgactcgcgctcgctggagacc
gaggaccagatgttcacggtcaccctggaggaggcacgcaagatctacgccgagcccaag
aagcggggcaggcggacggcggcggccactccaccactgcgggagctgggcgccgacccg
gcgacgggcaagccgatggtggtcaaggacggtcggttcggtccttacgtcaccgacggg
gagaccaatgcctcgctgcgcaagggcgatgccgtggagacgctgagcgacgagcgggcg
ggggagctgctggccgagcggcgcgcgaagggcggcacgacgaagcggacgaagcgcaag
cccgcggccaagagcgcggccaagagcgcgccgaagaccgcgcccaagagttcgcccagg
agttcgacgaagagctga
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