Actinoalloteichus hoggarensis: AHOG_04000
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Entry
AHOG_04000 CDS
T04975
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ahg
Actinoalloteichus hoggarensis
Brite
KEGG Orthology (KO) [BR:
ahg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahg03400
]
AHOG_04000 (sbcD)
DNA repair and recombination proteins [BR:
ahg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AHOG_04000 (sbcD)
Archaeal homologous recombinant proteins
AHOG_04000 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ASO18456
UniProt:
A0A221VY47
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All DBs
Position
861315..862478
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AA seq
387 aa
AA seq
DB search
MRILHTSDWHLGRTFHGRDLLGDQRDVLAGLADVVRAEGVDVVVIAGDLYDRAVPSGEAV
GVCHHILAALREAGAAIVLTSGNHDSAPRLGAYADFAAVGGLHLRTRVSALDEPVMLDDE
HGPVAFYGIPYLDPETARQSMARDGHRVASGHIGVLTEAMRRITADLSGRGGRTRSVVLA
HAFVTGGQGSESERRITVGGVEQVPATVFEGIDYVALGHLHGPQTLRPELRYSGSPLAYS
FSERAHQKSVWLVDLDADGLAAVRRHVLPVPRGLAVLTGTLDDLLTAPEHESSADCYLSI
TLTDAVRPLDPMRRLQDRFPHAVHLDWQPAGGLANAGLHYSEAVRGKNDRDLAASFIADC
RGSEPDDTELRLLDEAFHSIGGEKVRS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctccacacctccgactggcatctcggccgcacgtttcacggccgcgatctg
ctcggtgatcaacgggatgtactggcaggactggcggatgtggtgcgagcggagggagtc
gacgtggtcgtcatcgcgggcgatctctacgaccgtgccgttccgtcgggcgaggcggtg
ggggtctgtcaccacatcctcgccgcgctgcgagaggcgggcgccgccatcgtgctcacc
tcgggaaaccacgactcggcgccgaggctcggggcctatgcggacttcgccgcggtcggc
ggactacacctgcgtacccgcgtctccgcgctggacgagcccgtcatgctcgacgacgag
cacgggccggtcgcgttctacgggatcccctatctcgacccggagaccgctcggcagagc
atggcgcgcgacggccatcgcgtcgcgtccggccacatcggcgtcctcacggaggcgatg
cgtcgaatcaccgccgacctctcgggccgaggcggccggacacgctccgtggtgctggcg
cacgccttcgtcaccgggggccagggcagcgagtcggagcgcaggatcacggtcggggga
gtggaacaggtccccgcgaccgtcttcgagggcatcgactacgtcgcgctcggtcacctg
cacggcccgcagaccctgcggccggagctgcggtactcgggtagtccgctggcgtactcg
ttctccgagcgggcacaccagaagtcggtgtggctcgtcgatctcgatgccgacgggctc
gcggcggtgcgcagacacgtactgcccgtcccacgcgggctcgcggtgctgacaggcaca
ctcgacgacctgctgaccgctccggaacacgaatcgtcggcggactgctacctgtcgatc
accctgaccgacgccgtccgtccgctcgaccccatgcggcgccttcaggaccgcttcccc
catgcggtacacctggactggcagccggcaggcgggctggcgaacgccgggctgcactat
tccgaggcggtccggggcaagaacgatcgtgacctcgccgcgtcgttcatcgccgactgc
cgaggcagcgagccggacgacaccgagcttcgcctgctcgatgaggcattccactcgatc
ggcggagagaaggtgcggtcatga
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