Actinoalloteichus hoggarensis: AHOG_06705
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Entry
AHOG_06705 CDS
T04975
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
ahg
Actinoalloteichus hoggarensis
Pathway
ahg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AHOG_06705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahg03021
]
AHOG_06705
03019 Messenger RNA biogenesis [BR:
ahg03019
]
AHOG_06705
Transcription machinery [BR:
ahg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AHOG_06705
Messenger RNA biogenesis [BR:
ahg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AHOG_06705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
NACHT
FANC_SAP
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ASO18989
UniProt:
A0A221VZP3
LinkDB
All DBs
Position
1500347..1502200
Genome browser
AA seq
617 aa
AA seq
DB search
MVLAELRQLAGELGISDTTGMRKGDLIAAIRERQGGPARRASAPQAEAPAQLAVEIPEKP
AAPKAEAPQPAKTEEAPAQSGGEAEEEGGRRGRRRRSSTRSAGSPDQGDARGDRTTGEDR
AERNGRDDRGGERTERGDRTERQERGERQERGERQDRGEGRGRGERGEGRDRGEGRDRGE
GRDRGEPRDSRDNRDDDDDENGGGRRRGRRFRDRRRGRTRAEGGGGGGVANEPEVREDDV
LLPVAGILDVLENYAFVRTSGYLAGSNDVYVSLSLVRKYGLRRGDAITGAVRQPRDNEQQ
RQKFNPMVRVDTINGLEPDAVRNRPEFTKMTPLYPNERLRLETEPHVLTTRVIDLVMPVG
KGQRALIVSPPKAGKTMVLQAIANAITTNNPECHLMVVLVDERPEEVTDMQRSVKGEVIA
ATFDRPPADQTTVAELAIERAKRLVELGFDVVVLLDSITRLGRAYNLAAPASGRILSGGV
DSTALYPPKRFLGAARNIENGGSLTIFATALVETGSTGDTVIFEEFKGTGNAELKLDRKL
ADKRTFPAVDVDASSTRKEELLLSPDELAVTHKLRRVLAALDDQQALDLVLTQLRKTRTN
IEFLMQVAKNTPGNGDQ
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggccgaactgcgccagctcgcgggcgagctgggaatctccgacacgaccgga
atgcgcaagggagatctgatcgccgcgatccgggaacgtcagggtggtcccgcccgacgg
gcctccgcgccgcaggccgaggcgcccgcgcagttggcggtcgagatcccggagaagcct
gccgcgcccaaggcagaggctccgcagcccgccaagaccgaggaggctcctgcccagtcc
ggcggagaggccgaggaggagggcggccgtcgcgggcgccgtcgtcgctcgtcgacccgt
tccgcgggcagcccggaccagggcgacgcccggggcgaccgtacgacgggtgaggaccgt
gccgagcgcaacgggcgcgacgatcgcggcggcgagcggaccgagcgcggggaccgcacc
gagcgtcaggagcggggcgagcgtcaggagcggggcgagcgtcaggaccgcggcgagggc
cgcggccgaggcgagcgcggcgagggccgtgaccgcggcgagggccgcgaccggggcgag
ggccgggatcgcggtgagccgagggactcccgggacaaccgcgacgacgacgatgacgag
aacggcggcggcaggcggcgcggcaggcgcttccgcgaccgcaggcgcggtcgcacccgt
gccgagggcggcggtggcggcggagtcgcgaacgagcccgaggtccgcgaggacgacgtg
ctgcttccggtcgccggaatcctggacgtgctggagaactacgccttcgtccgcacctcc
ggctacctcgcgggctcgaacgacgtctacgtctcgctgtcgctggtgcgcaagtacggc
cttcgtcgcggcgacgcgatcaccggcgccgtgcggcagccgagggacaacgagcagcag
cggcagaagttcaacccgatggtccgggtcgacacgatcaacggcctggagccggacgcg
gtccgcaaccgccccgagttcaccaagatgacgccgctgtacccgaatgagcggctgcgt
ctggagaccgagccgcacgttctcaccacgcgggtcatcgatctggtgatgccggtcggc
aagggacagcgggcgctcatcgtctccccgcccaaggcgggcaagacgatggtgctgcag
gcgatcgcgaacgccatcaccacgaacaaccccgaatgccatctgatggtcgtgctcgtc
gacgagcgccctgaagaggtcaccgacatgcagcgttcggtcaagggcgaggtcatcgcg
gccacgttcgaccggccgcccgcagatcagaccaccgtcgcggagctcgcgatcgagcgt
gccaagcggctggtggaactgggcttcgacgtcgtcgtgctgctggactcgatcacccgt
ctgggccgggcctacaacctggccgcgcccgcctcaggccgaatcctctccggtggtgtc
gactccaccgcgctgtacccgcccaagcggttcctcggcgcggcacgcaacatcgagaac
ggcggctcgctcacgatcttcgccaccgctctcgtggagacgggatcgacgggtgacacg
gtgatcttcgaggagttcaagggcaccggcaacgccgagctgaagctggatcgcaagctc
gccgacaagcggaccttcccggccgtggacgtggacgcctcgagcacccggaaggaagag
ctgctgctctccccggacgagttggccgtgacgcacaagctgcgtcgggtgctggccgcg
ctggacgaccagcaggcgctcgacctggtgctcacgcagctccggaagacccgcaccaac
atcgagttcctcatgcaggtggccaagaacacgcccggcaacggcgatcagtga
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