Actinoalloteichus hoggarensis: AHOG_11085
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Entry
AHOG_11085 CDS
T04975
Symbol
sigF1
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ahg
Actinoalloteichus hoggarensis
Brite
KEGG Orthology (KO) [BR:
ahg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahg03021
]
AHOG_11085 (sigF1)
Transcription machinery [BR:
ahg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AHOG_11085 (sigF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_24
HTH_23
HTH_3
MarR
MarR_2
DUF7343
GerE
Sigma70_ECF
HTH_31
NirdL-like_HTH
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
ASO19860
UniProt:
A0A221W221
LinkDB
All DBs
Position
2523335..2524117
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AA seq
260 aa
AA seq
DB search
MTQRSPVSSRDHTYEHLLPLFATLTDLSEGDPRRTSVREKLITEHQALALHIAQRFSNRG
VAMDDLVQVANVGLIQAVDRFDPARGTDFLAFAVPTIMGEVRRYFRDRSWSVHLPRRLKE
LHLAINAVVRDLSQSLGRAPTSAEIATRLGISREEVIEGLEVRHAYRSSSLDEVLGDEDS
PSLSSTLGEEDPEMAVVENREALHPLLASLPERERTVLLLRFFGNMTQTQISERVGVSQM
HVSRILAKTLRHLREQLADS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgactcagcgctcgccggtgagcagccgggatcacacctacgagcatttgcttccgctc
ttcgcgaccctgaccgacctctcggagggggatcctcgtcgcacctcggtgcgggagaag
ttgatcaccgagcaccaggcgctcgctttgcacatcgcccagcgcttcagcaaccgcggc
gtggccatggacgacctcgtccaggtggccaacgtcgggctgatccaggctgtcgatcgt
ttcgacccggcccggggcaccgacttcctcgccttcgccgttcccacgatcatgggcgag
gttcgtcgctatttccgagaccggagctggtcggtccatctgccgagacggttgaaggaa
ctgcatctggcgatcaacgcggtggtgcgggatctctcccagtctctcggccgggctccg
acgtcggcggagatcgccaccaggctgggcatctctcgggaagaggtcatcgagggcctg
gaggtccgtcatgcctaccggtcctcctcactggacgaggtcctcggtgacgaggactcg
ccgtcactcagcagcacgctgggcgaggaggatccggagatggccgtcgtggagaaccgg
gaggcgttgcatccgctgctcgcctcgctgccggagcgggagcgcacggttctgttgctc
cgattcttcgggaacatgacacagactcagatcagcgagcgggtcggagtctcgcagatg
catgtctcccggatcctcgccaagacactgcgccatctgcgtgagcagctcgccgacagc
tga
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