Actinoalloteichus hoggarensis: AHOG_13135
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Entry
AHOG_13135 CDS
T04975
Symbol
vsr
Name
(GenBank) Very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ahg
Actinoalloteichus hoggarensis
Brite
KEGG Orthology (KO) [BR:
ahg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahg03400
]
AHOG_13135 (vsr)
DNA repair and recombination proteins [BR:
ahg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
AHOG_13135 (vsr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
ASO20270
UniProt:
A0A221W356
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All DBs
Position
3004715..3005161
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AA seq
148 aa
AA seq
DB search
MARAAKTESWASSPGVRTGMRANRGRDTRPELAVRRAVHAMGLRYRVSARPLPGLRRTAD
LVFTRARVAVFVDGCFWHGCPRHHTVAKTNAGYWAEKVRRNRERDRETDRLLIEAGWRPL
RLWEHEPVTEAARRIAAEVRRAIPPGAA
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgcggcgaagacggagtcctgggcctcctcgccgggggtccgcacgggcatg
cgggccaaccggggtcgcgacacccgtccggagctggccgtgcgccgtgccgtccacgcc
atgggactgcgctatcgcgtctcggcgcgcccgctcccgggcctgcgccggacggccgac
ctcgtcttcacccgggccagggtggcggtcttcgtcgacggctgcttctggcacggctgc
ccacgacatcacacggtcgccaagaccaacgccggctactgggcggagaaggtccgccgc
aaccgcgagcgcgaccgggagaccgaccggttgttgatcgaggcaggctggcggccgctg
cgcctctgggagcacgagccggtgaccgaggcggcccggcgcatcgcggcggaggtgcgt
cgtgcgatccctccgggcgcggcttga
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