Actinoalloteichus hoggarensis: AHOG_22865
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Entry
AHOG_22865 CDS
T04975
Symbol
polC3
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ahg
Actinoalloteichus hoggarensis
Pathway
ahg03030
DNA replication
ahg03430
Mismatch repair
ahg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AHOG_22865 (polC3)
03430 Mismatch repair
AHOG_22865 (polC3)
03440 Homologous recombination
AHOG_22865 (polC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahg03032
]
AHOG_22865 (polC3)
03400 DNA repair and recombination proteins [BR:
ahg03400
]
AHOG_22865 (polC3)
Enzymes [BR:
ahg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AHOG_22865 (polC3)
DNA replication proteins [BR:
ahg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AHOG_22865 (polC3)
DNA repair and recombination proteins [BR:
ahg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AHOG_22865 (polC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DUF7508
Motif
Other DBs
NCBI-ProteinID:
ASO22186
UniProt:
A0A221W973
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All DBs
Position
5382565..5384313
Genome browser
AA seq
582 aa
AA seq
DB search
MSGPPVSLPAMTDLARPPELQLTFDELGTPLRAVTFVVVDLETTGGGRGDAITEIGAVKV
RGGEVLGEFATLVNPGRGIPPMIMSLTGITDAMVTEAPRIDSVLPAFLEFAAGCVLVAHN
APFDVGFLRAAAERLDRPWPRPTVLCTVKLARRVLRRDEAPNVKLATLARLFGSPTTPSH
RALTDARATVDVLHGLLERVGPVGVQSLEELLDYLPQVSTAQRRKRQLAADLPHAPGVYL
FRGPREEVLYVGTAVDLRRRVRQYFTAGETRARVREMVALAERVDVVECAHSLEAEVREL
RLLAAHRPRYNRRSTTPHRAWWIVLTEEPFPRLSVVRRPRDGAMGPFRTRRAAQDALETL
HEGSSVRRCAERIPARDQRGRPCALAEIGRCAAPCAGRQSVEDYAPSVIEVADLFSGVRT
AVLERLDGRLGELADQQRFEDAARHRDRLATLVRALDRGQRLAALAAVGELVAARPDGAG
GWHLAVIRHGRLASAGTARRGVPPMPVVEMLRASAETVLPEPGPLRGATADEVIVIRRWL
TTGGTRLVDSDVPWAEQTGGAGRWQRWAAKADAGRAGYAAAD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggcccgccggttagcctgcccgcgatgaccgacctggcacgccctcccgagctc
cagctcaccttcgacgaactcggcacaccgttgcgtgccgtcacgttcgtcgtggtggac
ctggagaccaccggcggcggtcggggcgacgccatcaccgagatcggcgccgtgaaggtt
cgcggcggcgaggtgctcggcgagttcgccaccctcgtcaatcccggccgaggcatcccg
ccgatgatcatgtcgctgaccggcatcaccgacgcgatggtcaccgaggcgccccgcatc
gactccgtcctgcccgcgttcctggagttcgccgcgggctgcgtcctggtcgcccacaac
gcccccttcgacgtcgggttcctgcgcgccgccgcagaacgcctcgaccgcccctggccc
cggcccaccgtcctgtgcacggtgaagctggcccgacgggtcctgcgccgggacgaggcg
cccaacgtcaagctcgccaccctggcccggctgttcggctcccccacgacccccagccac
cgcgcgctgaccgacgcccgcgccaccgtcgacgtgctgcacggactgctcgaacgagtc
ggccccgtcggcgtccagtccctggaggagctgctcgactacctgccgcaggtgagcacc
gcacagcgacgcaagcgccagctcgccgccgacctgccgcacgcccccggcgtctacctg
ttccgaggcccccgcgaggaggtgctgtacgtgggcaccgccgtggacctccgacgtcgg
gtccggcagtacttcaccgcgggcgagacgcgggcgcgcgtccgggagatggtcgccctc
gccgagcgcgtcgacgtggtggagtgcgcccactccctggaggcggaggtccgcgagtta
cgactgctcgccgcccaccgcccccgctacaaccgccggtccaccaccccgcatcgcgcg
tggtggatcgtgctgaccgaggagccctttcctcggctctccgtggttcgacggccgcga
gacggcgccatggggccgtttcgcacccggcgtgcggcccaggacgcactggagacgctg
cacgagggcagttcggtacgtcgctgcgccgaacggattccggctcgcgaccaacgcggc
cgaccgtgtgccctcgccgagatcggccgctgcgccgcgccctgcgcgggcaggcagagc
gtcgaggactacgcgccgtcggtgatcgaggtcgccgacctcttcagcggtgtcaggacc
gccgtgctcgaacggctcgacggcagactcggcgaactcgccgatcagcagcgcttcgag
gacgcggcccggcatcgcgaccggctggccaccctcgtgcgcgccctggaccggggccag
cggctcgccgccctggccgccgtcggcgaactcgtggcggcccggcccgacggcgcgggc
ggctggcatctcgccgtgatccgccacggcaggctcgcctccgcaggcaccgcccgacgc
ggcgtcccgccgatgcccgtggtcgagatgctgcgggcgagcgccgagaccgtgctgccc
gaacccggaccgctacgcggcgcgacggccgacgaggtgatcgtgatccgccgctggctc
acgaccggcggcacccgcctggtggactccgacgtgccgtgggcggagcagacgggcggc
gccggccgctggcagcggtgggcggccaaggccgacgcgggccgggcgggctacgcggcc
gccgactga
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