KEGG   Aeromonas hydrophila AL06-06: RY45_00760
Entry
RY45_00760        CDS       T03748                                 
Name
(GenBank) RNA helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
ahh  Aeromonas hydrophila AL06-06
Pathway
ahh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ahh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RY45_00760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ahh03019]
    RY45_00760
Enzymes [BR:ahh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     RY45_00760
Messenger RNA biogenesis [BR:ahh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     RY45_00760
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_22 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: AJQ52686
UniProt: A0A081UXF6
LinkDB
Position
complement(142875..144164)
AA seq 429 aa
MSKTHLTTDKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKT
LAFLAATFNYLLTHPLTKPRLINQPRAIIMAPTRELAVQIYNDAESMSASTGLKLGLAYG
GEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIR
FLFRRMPPATERLSMLFSATLSLRVQELAYEHMNHPEHVQIEPEQMTGVRIKEELFYPSN
EDKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILE
DFTKGTVDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLA
CEDYAFNLPAIEEYIHHPIPVSKYDREALLDDVTAPKRVFRNRQPVNRNMRDRQGGGNSN
NRRRPPRKS
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacgaccgacaaattcgcccaaatgggcctcgaacccgaagtt
ctggctggtctggaatcaaagggatttcactattgcacccccatccaggcactgtctctg
ccactgctggtagaaggtcatgacctcgccggtcaggcccagacagggaccggcaaaacc
cttgccttcctggccgccaccttcaactatttgttgacccatccgctgaccaagccgcgc
ctcatcaaccagccgcgcgccatcatcatggccccgacccgggagctggcggtccagatc
tacaacgacgcggagagcatgtccgcctcgaccggcctcaagctcggcctcgcctacggt
ggcgaagggtacgacaagcagctggccgtgctggagcagggtgtcgacatactgatcggc
accaccggccgcatcatcgactacttcaagtccaaggtcatcgatctgagcaatattcag
gtcgtggtgctggacgaagcggatcgcatgttcgatctcggcttcatcaaggacatccgt
ttcctgttccgccgcatgccgcccgccaccgagcgtctgagcatgctgttctccgccacc
ctctccctgcgcgtgcaggagctggcctacgaacacatgaaccacccggaacacgtacag
atcgagccggagcagatgaccggcgtgcggatcaaggaggagctgttctacccctccaac
gaagacaagatgttgctgctgctctccctgatggaagaggagtggccggagaaagccatc
gtcttcgccaacaccaagcacgtctgtgaagacgttcatgcctggctggagaacgatggc
caccgcgtcggcctgctgaccggtgacgtgccgcagaagaagcggatgaagatcctggaa
gacttcaccaagggcacggtcgacatcctggttgccaccgacgtggccgcccgcggtctg
cacattccggacgtgacccacgtcttcaactatgacctgcccgacgacgccgaagactac
gtacaccgcatcggtcgtaccggtcgtgccggcaagagcggtcactccatcagcctggcc
tgtgaagactatgccttcaacctgccggccatcgaggagtacatccaccacccgatcccg
gtcagcaagtatgaccgcgaggcgctgctggatgacgtgaccgcaccgaagcgggtgttc
cgcaaccgtcagccggtgaaccgcaacatgcgcgatcgccagggcggtggcaacagcaac
aaccgccgtcgtccgccccgcaagagctga

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