Aeromonas hydrophila AL06-06: RY45_00760
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Entry
RY45_00760 CDS
T03748
Name
(GenBank) RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ahh
Aeromonas hydrophila AL06-06
Pathway
ahh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RY45_00760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahh03019
]
RY45_00760
Enzymes [BR:
ahh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RY45_00760
Messenger RNA biogenesis [BR:
ahh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RY45_00760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AJQ52686
UniProt:
A0A081UXF6
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All DBs
Position
complement(142875..144164)
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AA seq
429 aa
AA seq
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MSKTHLTTDKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKT
LAFLAATFNYLLTHPLTKPRLINQPRAIIMAPTRELAVQIYNDAESMSASTGLKLGLAYG
GEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIR
FLFRRMPPATERLSMLFSATLSLRVQELAYEHMNHPEHVQIEPEQMTGVRIKEELFYPSN
EDKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILE
DFTKGTVDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLA
CEDYAFNLPAIEEYIHHPIPVSKYDREALLDDVTAPKRVFRNRQPVNRNMRDRQGGGNSN
NRRRPPRKS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacgaccgacaaattcgcccaaatgggcctcgaacccgaagtt
ctggctggtctggaatcaaagggatttcactattgcacccccatccaggcactgtctctg
ccactgctggtagaaggtcatgacctcgccggtcaggcccagacagggaccggcaaaacc
cttgccttcctggccgccaccttcaactatttgttgacccatccgctgaccaagccgcgc
ctcatcaaccagccgcgcgccatcatcatggccccgacccgggagctggcggtccagatc
tacaacgacgcggagagcatgtccgcctcgaccggcctcaagctcggcctcgcctacggt
ggcgaagggtacgacaagcagctggccgtgctggagcagggtgtcgacatactgatcggc
accaccggccgcatcatcgactacttcaagtccaaggtcatcgatctgagcaatattcag
gtcgtggtgctggacgaagcggatcgcatgttcgatctcggcttcatcaaggacatccgt
ttcctgttccgccgcatgccgcccgccaccgagcgtctgagcatgctgttctccgccacc
ctctccctgcgcgtgcaggagctggcctacgaacacatgaaccacccggaacacgtacag
atcgagccggagcagatgaccggcgtgcggatcaaggaggagctgttctacccctccaac
gaagacaagatgttgctgctgctctccctgatggaagaggagtggccggagaaagccatc
gtcttcgccaacaccaagcacgtctgtgaagacgttcatgcctggctggagaacgatggc
caccgcgtcggcctgctgaccggtgacgtgccgcagaagaagcggatgaagatcctggaa
gacttcaccaagggcacggtcgacatcctggttgccaccgacgtggccgcccgcggtctg
cacattccggacgtgacccacgtcttcaactatgacctgcccgacgacgccgaagactac
gtacaccgcatcggtcgtaccggtcgtgccggcaagagcggtcactccatcagcctggcc
tgtgaagactatgccttcaacctgccggccatcgaggagtacatccaccacccgatcccg
gtcagcaagtatgaccgcgaggcgctgctggatgacgtgaccgcaccgaagcgggtgttc
cgcaaccgtcagccggtgaaccgcaacatgcgcgatcgccagggcggtggcaacagcaac
aaccgccgtcgtccgccccgcaagagctga
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