Aeromonas hydrophila AL06-06: RY45_02690
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Entry
RY45_02690 CDS
T03748
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ahh
Aeromonas hydrophila AL06-06
Pathway
ahh00300
Lysine biosynthesis
ahh00470
D-Amino acid metabolism
ahh01100
Metabolic pathways
ahh01110
Biosynthesis of secondary metabolites
ahh01120
Microbial metabolism in diverse environments
ahh01230
Biosynthesis of amino acids
Module
ahh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ahh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RY45_02690 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RY45_02690 (dapF)
Enzymes [BR:
ahh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RY45_02690 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AJQ53041
UniProt:
A0ABD7GA49
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All DBs
Position
544555..545385
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AA seq
276 aa
AA seq
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MLIDFSKMHGLGNDFMVVDGVTQKVFFSNEVIKKLADRHFGIGFDQLLLVEPPYDPELDF
HYRIFNADGSEVEQCGNGARCFARFVRLKGLINRDRIAVSTARGRIVLQLEGENQVTVNM
GVPQFEPGKIPFRAQKAEKTYLLRAQEHTVMCGAVSMGNPHCVIEVPSVADAPVATLGPI
MERHERFPERVNVGFMEMVNASEIKLRVFERGVGETLACGTGACAAVVVGISQGKLKERV
TVTLPGGKLTIAWKGPGQPVYMTGPAEHVFDGQIEL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgttgatagatttttccaagatgcacgggctggggaacgacttcatggtggtggatggc
gtcacccagaaggtgtttttcagcaatgaggtcatcaagaagctggcggatcgccacttc
ggcatcggtttcgaccagctgctgctggtggagccgccttatgatcccgagctcgacttt
cactaccgcatcttcaatgccgatggcagcgaggtggagcagtgcggcaacggtgcccgc
tgtttcgcccgtttcgtgcgcctcaaggggctgatcaaccgggatcgcatcgcggtgagc
acggcgcgcggccgcatcgtgctgcagctggaaggggagaaccaggtcacggtcaacatg
ggggtgccccagttcgagccaggcaagatcccgttccgggcccagaaggcggaaaaaacc
tacttgctgcgggcccaggaacatactgtgatgtgcggggccgtctccatgggcaatcct
cactgcgtcatcgaggtgccctcggtggccgatgcgccggtggcgaccctgggtcccatc
atggagcgacacgagcgctttcccgagagggtcaacgtcggcttcatggagatggtcaac
gccagcgagatcaagctgcgggtgttcgaacgcggggtgggcgagaccctggcctgcggg
accggcgcctgcgcggccgtggtggtgggcatcagccagggcaagctcaaggagcgggtc
accgtcaccctgccggggggcaagctgaccatcgcctggaaggggccgggtcagccggtc
tacatgaccgggccggccgagcacgtatttgacggtcagatagagttatag
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