Aeromonas hydrophila AL06-06: RY45_03210
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Entry
RY45_03210 CDS
T03748
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ahh
Aeromonas hydrophila AL06-06
Brite
KEGG Orthology (KO) [BR:
ahh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahh03016
]
RY45_03210
Enzymes [BR:
ahh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RY45_03210
Transfer RNA biogenesis [BR:
ahh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RY45_03210
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AJQ53140
LinkDB
All DBs
Position
complement(647064..649085)
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AA seq
673 aa
AA seq
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MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
SALIRTEKEKEVAEPDALLEQSVTRFVARVKMFRDRLNVVADHPLIKDAIKARVKKGLDE
KEFKEGDWVVATLKRHALVDGNFSAEITQKIASQEDHNVPWWVVLARHNLAQVEPADLPE
WKVIEEEELPRTDLTATPFFTIDGAKTKDMDDALAIRKLDNGWELLVAIADPTAYVAEGS
ELDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLLIAEDGLLLEETE
FFAARISSHARLTYDDVSDWAEHGKPLDIDAGVLAQLPLMKAMTEARIAWRTEHALVFPD
RPDYDFELGENGEVLAIHVEPRRIANRMVEESMIAANICAGRVLGKQVGYGIFNVHTGFD
EESLDGAIDLLKSAEAPFEKEEIASLSGFCALRRWIDNLDTRWLDGKIRRFQSYALMSAE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGERPNLELTEHLTACRRLHR
MVERDIGDWLYVRYLKADAGTDKVFNAEIIDVMRAGLKLRLRENGAVVFMPARHILDNKD
RLECNWDNGRVYMDKTEVVYELGQIIEVKLTEAVEETRSLIAKPAVELVPGPAPVAPTSE
ADAAPADEAPKAE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccc
aagaaagagggtgtgatccgcgcctccgatcggggcttcggcttcctggaggtcgatgag
aagaccagctatttcgtgccgcctccctacatgaagaaggtgatgcacggtgaccgggtg
agcgccctgatccgcaccgagaaagagaaggaagtggccgagccggatgccctgctggag
cagtccgtcacccgtttcgtggcccgcgtcaagatgttccgcgaccgcctcaacgtggtc
gccgatcacccgctgatcaaggatgccatcaaggcccgcgtcaagaaggggctggacgag
aaagagttcaaggaaggggactgggtggttgccaccctcaagcgtcacgccctggtggac
ggcaacttctctgccgagatcacccagaagatcgcctcgcaggaagatcacaacgtgccc
tggtgggtggtgctggcgcgccacaacctggcccaggtcgagccggcggatctgccggag
tggaaggtgatcgaagaggaagagctgccgcgcaccgatctgaccgcgacccccttcttc
accatcgacggcgccaagaccaaggacatggacgatgccctggccatccgcaagctggac
aacggctgggagctgctggtggccatcgccgacccgaccgcctacgtggccgagggcagc
gagctggacaaggaagccgcccagcgcgccttcaccgtctacatgccgggccgcaacgtg
ccgatgatcccgcgcaccctctccgacgagctctgctccctgaaagagggcgaggagcgc
aacaccctgtgtgcccgtctgctcatcgccgaggatggcctgctgctggaagagaccgag
ttcttcgccgcccgcatcagctcccacgcccgtctcacctatgacgacgtctccgactgg
gccgaacacggcaagccgctggatatcgacgccggcgtgctggcccagctgccgctgatg
aaggcgatgaccgaggcgcgcatcgcctggcgcaccgagcatgccctggtgttcccggat
cgtcccgactacgacttcgagctgggcgagaacggcgaagtgctggccatccacgtcgag
ccgcgccgcatcgccaaccgcatggtggaagagtcgatgatcgccgccaacatctgcgcc
ggccgcgtgctcggcaagcaggtcggctacggcatcttcaacgttcacaccggctttgac
gaagagtccctcgacggcgccatcgatctactgaaaagcgccgaggccccgttcgagaag
gaagagatcgccagcctgtccggcttctgcgccctgcgccgctggatcgacaacctggac
acccgctggctggacggcaagatccgccgcttccagagctatgcgctgatgtccgccgaa
ccgggcgcccactacggcctggggctggatgcctacgccacctggacctcaccgatccgc
aagtacggcgacatggtcaaccatcgcctgctgaaagccgtcatcgccggcaagaccccg
ggtgagcgcccgaacctggagctcaccgagcacctgaccgcctgccgccgcctgcaccgc
atggtggagcgcgacatcggcgactggctctatgtccgctacctcaaggccgatgccggc
accgacaaggtgttcaacgccgagatcatcgacgtgatgcgcgccggcctcaagctgcgt
ctgcgcgagaacggcgccgtggtgttcatgcccgcccgccatatcctggacaacaaggat
cggctggagtgcaactgggacaatggtcgcgtctatatggacaagaccgaggtggtctac
gagctcggccagatcatcgaggtcaagctgaccgaagcggtggaagagacccgctccctc
atcgccaagccggcggtggagctggtgccgggcccagccccggtcgcccccaccagcgag
gccgatgccgcgcctgccgacgaggcccccaaggccgaataa
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