KEGG   Aeromonas hydrophila AL06-06: RY45_04500
Entry
RY45_04500        CDS       T03748                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ahh  Aeromonas hydrophila AL06-06
Pathway
ahh03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ahh00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    RY45_04500 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ahh03019]
    RY45_04500 (rnc)
   03009 Ribosome biogenesis [BR:ahh03009]
    RY45_04500 (rnc)
   03036 Chromosome and associated proteins [BR:ahh03036]
    RY45_04500 (rnc)
Enzymes [BR:ahh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     RY45_04500 (rnc)
Messenger RNA biogenesis [BR:ahh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RY45_04500 (rnc)
Ribosome biogenesis [BR:ahh03009]
 Eukaryotic type
  90S particles
   RNase
    RY45_04500 (rnc)
 Prokaryotic type
  rRNA processing factors
   RY45_04500 (rnc)
Chromosome and associated proteins [BR:ahh03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     RY45_04500 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: AJQ53383
UniProt: A0AAQ2RKM6
LinkDB
Position
930432..931103
AA seq 223 aa
MNIKMNRLQSRLGHVFQDQELLTRALTHRSAGSRHNERLEFLGDSILSLVIADDLFHRFP
QAAEGDLSRMRATLVREKTLAELGREFDLGDHLILGPGELKSGGFRRESILADTVEAVIG
AVYLDTNLETVRTLLLGWYASRLEEIKPGIEQKDPKTRLQEILQGSRKSLPTYTVTNVKG
EAHNQEFTVQCDVEGLDGPLVGVGTSRRKAEQAAAQQALEKLS
NT seq 672 nt   +upstreamnt  +downstreamnt
atgaatatcaagatgaacagactgcagtcccgtctcgggcatgtctttcaggatcaagaa
ctgctgacccgggcgctgactcaccgcagcgccggttcccgtcacaacgaacgactggaa
ttcctgggtgactccattttgagtctggtgattgccgatgatctcttccaccgcttcccg
caggcggcggaaggggatctcagccgcatgcgcgccaccctggtgcgcgagaagactctg
gccgaactgggccgggagttcgacctcggggatcacttgatcctggggccgggtgagctg
aaaagcggcggttttcgccgtgaatccattctggccgacacggtcgaggcggtgatcggc
gccgtctatctggataccaatcttgagacggtacggacgctgctgctgggctggtacgcc
agccgcctggaggagatcaaaccgggcatagagcagaaggatcccaagacccgtctgcaa
gaaattctgcagggaagccgcaaatccctgccgacctacacagtgaccaacgtcaagggc
gaagcccacaaccaggaattcaccgtccagtgtgacgtggaaggcctggatggtccgctg
gtcggggtcggcaccagccgtcgcaaggccgaacaggccgcagcgcagcaagcattggaa
aaactgtcatga

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