Aeromonas hydrophila AL06-06: RY45_05725
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Entry
RY45_05725 CDS
T03748
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ahh
Aeromonas hydrophila AL06-06
Pathway
ahh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ahh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RY45_05725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ahh03000
]
RY45_05725
03400 DNA repair and recombination proteins [BR:
ahh03400
]
RY45_05725
Enzymes [BR:
ahh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RY45_05725
Transcription factors [BR:
ahh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RY45_05725
DNA repair and recombination proteins [BR:
ahh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RY45_05725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_Tnp_ISL3
HHH
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AJQ53608
LinkDB
All DBs
Position
complement(1201323..1202888)
Genome browser
AA seq
521 aa
AA seq
DB search
MPTDHAMTMPPATEHEPSLPLSAEQCHAARLARDARFDGRFFTGVLSTGIYCRPVCPARP
PHEHNVRYFQSAAAAEQHGLRPCLRCRPELAPAAPGDLPPTLARLLARIDRGELAEGSLT
TLAEQAGISERTLRRQFEQHLGASPKQVEQTRRLLLAKRLLTETRLPITDIAFAAGFASI
RRFNDAWQQAYGLAPRALRRQSEPAGDAAALTQAAPQPEEGAMLTLQLPYRPPYDVAAML
AFYRLRAIPGLERVDGEVYERLHQVGDQVARVRISQGKGHSLLLSVHDLPPAALPDLLYR
VRRMWDLDADMQRIGARLGQDPLLARLQARWPGVRLPAGWDEYEVMLRAIVGQQVSVKGA
ITILGRLVARTEAQFGVAQLPTPAQLCELNLDGIGMPGSRIRTLQGLAQALASGELSLIS
ASDEQLLALPGIGPWTVAYWRLRCGLDPDAFPASDLVLLKALGGGTKLPVKAVLAHSERW
RPWRGYAASWLWHAMSEEPALLTEPAPGRAASDSQAEETTP
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagatcacgccatgacgatgccgccggccacagagcatgagccaagcctgccg
ctcagcgccgagcaatgccatgccgcccgcctggcccgcgatgcgcgcttcgacggccgc
ttctttaccggcgtgctctccaccggcatctactgccggcctgtctgtccggcgcggcca
ccgcacgagcacaacgtgcgctacttccaaagcgccgccgcagcggagcagcacggcctg
cgtccctgcctgcgttgccggcctgagctcgcgcccgccgcccccggcgatctgccgccg
acgctggcgcgcctgctggcccggatcgatcgcggcgaactggcggaaggctcgctcacc
acgctggcggaacaggccggcatcagtgagcgcacgctgcgccgccagttcgagcaacac
ctcggcgcctcgccgaaacaggtggagcagacgcgccggctgctgcttgccaagcggctg
ttgaccgaaacccggctgcccatcaccgacatcgcgtttgcggcgggctttgccagcatt
cgccgcttcaatgacgcctggcagcaggcatacggcttggcgccgcgggccctgcgccgt
cagagcgaaccagccggcgacgccgccgccctgacgcaggctgcgccgcagcccgaggag
ggggcgatgctcacgttgcaactgccctaccgccccccgtacgacgtggcggccatgctg
gcgttctaccggctgcgcgccattccggggttggagcgggtggatggcgaggtctatgaa
cgcttgcaccaggtcggcgatcaggtcgcgcgggtgcgcatcagccagggcaaggggcac
agcctgctgctcagcgtccatgatctgccgcccgccgcgctgccggatctgctgtatcgg
gtgcgccggatgtgggatctcgatgccgacatgcagcgcatcggtgcgcggctcgggcag
gatccgctgctggcgcgcctgcaggcgcgctggccgggggttcggctgcccgccggctgg
gatgagtacgaggtgatgctgcgcgccatcgtcggccagcaggtgtcggtcaagggggcc
atcaccatactcgggcggctggtggcgcgtaccgaggcgcaattcggggtggcgcagttg
cccacccctgcccagctgtgtgagctcaacctggacggtatcggcatgcccggtagccgg
atcagaacgctgcaggggctggcgcaggcgctggccagcggcgagttgagcttgatcagc
gccagcgatgaacagctgctggcactgcccggtatcggcccctggacggtcgcctactgg
cggctgcgctgcgggctggatccggatgcctttcccgcctcggatctggtgctactgaag
gcgctggggggcggcaccaagttgccggtgaaagcggtattggcccacagcgaaaggtgg
cggccctggcgcggctacgcggcgagctggctgtggcatgccatgagcgaggagccggca
ctgctgaccgagccggcaccaggccgcgcagcaagcgacagccaagcagaggagacaacc
ccatga
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