Aeromonas hydrophila AL06-06: RY45_10845
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Entry
RY45_10845 CDS
T03748
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ahh
Aeromonas hydrophila AL06-06
Pathway
ahh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RY45_10845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahh03019
]
RY45_10845
Enzymes [BR:
ahh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RY45_10845
Messenger RNA biogenesis [BR:
ahh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RY45_10845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
AAA_22
PRAI
LPD39
Motif
Other DBs
NCBI-ProteinID:
AJQ54553
LinkDB
All DBs
Position
complement(2360776..2362161)
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AA seq
461 aa
AA seq
DB search
MSFNELGLSPHILRAVKELGYEQPTPIQQQAIPAILAGQDVLGGAQTGTGKTAGFTLPML
QRLLANHGRGRRQVRALVLTPTRELAAQVGESIIKYAHHLPFRTLIAYGGVSIKPNLDAI
KLGIDILVATPGRLLDLLTQGALTLSELEVLVLDEADRMLDMGFIVDIRRIMKALPAERQ
TLLFSATFSSEIKALADDLLNDPTLIEVDPSNTAAEQVTQRIIQVDRERRRELLSHMIGR
GNWQRVLVFVRTKQIADRLAQQMQKDGLDTVAIHGDKSQGARNRALADFREGKVRVLVAT
DIAARGLDIDQLPHVINFELPQMAEDYIHRIGRTGRAGRGGEAISLVSQDELGQLKGIEA
LIGQSLSVEILEGYEPSGKPSRQTLPGSKPVQNPPRVRGAANAKGGNGKSAAGKSKAKSD
GGKKPAPARKREVVGEDIGFTPMRRLPKAQRDDYQDNSNEE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaacgaactgggtctgtctccgcacatcctgcgggccgtcaaggagctgggt
tacgaacagccaacccccatccagcaacaagccatccccgccattctggccggacaggat
gtgctcggcggcgcccagacaggcacaggcaaaacggccggtttcaccctgcccatgctg
cagcgcctgctggccaaccatggccgtggccgccgtcaggtgcgggccctggtgctgacc
ccgacccgcgaactggctgcccaggtgggtgagagcatcatcaaatatgcccaccacctg
ccgtttcgcaccctgatcgcctacggcggcgtcagcatcaagcccaatctggacgccatc
aagctcggcatcgacatcctggtggccactcctggccgcctgctggatctgctgacccag
ggggcgctgaccctgtccgagctggaagtgctggtgctggacgaagcggatcgcatgctc
gacatgggcttcatcgtcgacattcgccgcatcatgaaggcgctgccggccgaacggcag
accctgctgttctccgccaccttctcaagcgagatcaaggcgctggcggatgatttgctc
aacgaccccaccctgatcgaggtggatcccagcaacaccgccgccgagcaggtgacccag
cgcatcatccaggtcgaccgggaacgtcgccgcgagctgctctcccacatgatcggccgc
ggcaactggcagcgggtgctggtgttcgtgcgcaccaagcagatcgccgatcgcctggcc
cagcagatgcaaaaagacgggctcgataccgtcgccatccacggcgacaagagccagggt
gcccgcaaccgggcgctggcggattttcgggaaggcaaggtgcgggtgctggtggcgacc
gacatcgccgcccgcggcctcgacatcgatcaactgccccacgtgatcaacttcgagttg
ccccagatggcggaggattacatccaccgcatcggtcgcaccggccgcgccggccgtggc
ggcgaggccatctcgctggtgagccaggacgagctgggccagctcaaggggatagaggcg
ctgatcggccaatccctctcggtggagatcctggaagggtatgagcccagtggcaaaccg
agccggcagaccctgccgggcagcaagccggtacaaaatccgccgcgggtccgtggcgcc
gccaatgccaagggcggcaacggcaaatccgccgcaggcaagagcaaggcaaagagcgat
ggcggcaagaagcctgccccagcccgcaagcgggaagtggtgggcgaggatattggcttt
acccccatgcgccgcctgcccaaggcccagcgcgacgactatcaggacaactccaacgag
gagtaa
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