Aeromonas hydrophila AL06-06: RY45_11215
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Entry
RY45_11215 CDS
T03748
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ahh
Aeromonas hydrophila AL06-06
Brite
KEGG Orthology (KO) [BR:
ahh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahh03032
]
RY45_11215
03400 DNA repair and recombination proteins [BR:
ahh03400
]
RY45_11215
Enzymes [BR:
ahh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RY45_11215
DNA replication proteins [BR:
ahh03032
]
Prokaryotic type
DNA Topoisomerases
RY45_11215
DNA repair and recombination proteins [BR:
ahh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RY45_11215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PLC-beta_C
Motif
Other DBs
NCBI-ProteinID:
AJQ54617
LinkDB
All DBs
Position
2436537..2439284
Genome browser
AA seq
915 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELGNDWN
KPYKKSARVVGDVIGKYHPHGDIAVYDTIVRMAQDFSMRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMARISHELLADLDKETVDWVPNYDGTEMIPAVMPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEIVNGCLALIENGDLTIDELMTYITGPDFPTGGIINGRSGIVQAYRTGRGSV
YVRAKAEVEVDEKTSRETIIVHEIPYQVNKARLIEKIAELVKEKKIEGISALRDESDKDG
MRIVIEIKRGESGEIVLNNLYKHTQMQTTFGINMVALDNNQPKVMNLKEILDAFLLHRRE
VVTRRTVFELRKARDRAHILEGLAVALANIDPVIELIRHSATPADAKAGLVARGWELGNV
ASMLEKAGDDAARPEWLEPEFGIREGHYYLTEQQAQAILDLRLHKLTGLEHEKILEEYQS
LLDLIAELLFILASPVRLMEVIRDELLAVREQYGDERRTEISMSSAEINIEDLITPEDVV
VTLSHQGYVKYQPLSDYEAQRRGGRGKSATRIKEEDFVERLLVANTHDTILCFSTRGKVY
WLKVYQLPEASRGARGRPIINLLPLEEGERITAILPVKEYDAEKYVFFATANGTVKKTSL
SDFSRPLSSGIRAINLKEGDELIGVDITDGSNEIMLFSDAGKVVRFAEGSGRADADATDE
VETDDDAGNDDDGSDNGEGTESKGTFKGVRPMGRTAAGVRGIKLGAGDKVVSLIVPRGDG
AILTATENGYGKRTALDEYPTKSRGTQGVISIKVDERNGKVIDAIQVEDTDQIMLITNGG
TLVRTRVSEVSVIGRNTGGVRLIRTGEDETVVGLQRVAESDEDENEVLAVEGEVSEDTDT
AADTGAVDAGEAGDE
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctggccagagagatcacgccggtcaacatcgaagaagagctcaagagttcc
tatcttgattacgccatgagcgtgatcgtaggacgagctctgccggatgtgcgtgatggc
ttgaaaccggttcaccgccgcgttctgtatgcaatgaacgagctggggaacgactggaac
aagccctataaaaaatcggcccgtgtggtcggtgacgtaatcggtaaatatcacccgcac
ggcgacattgccgtgtatgacaccattgtccgcatggcgcaggatttctccatgcgttac
atgctggtcgatggtcagggcaacttcggttcggtcgacggcgacagcgccgccgccatg
cgttacaccgaagtgcggatggcccgcatctcccacgagctgctggccgatctggacaaa
gagaccgtggactgggtgccgaactatgatggcaccgagatgatcccggctgtcatgccc
accaaggttcccaacctgctggtcaacggctcctccggtattgcggtgggcatggcgacc
aacattccgcctcacaacctcaccgagatagtcaacggctgtctggcgttgatcgagaac
ggcgacctcaccatcgacgagctgatgacctacatcaccggcccggatttccccactggt
ggcatcatcaacggtcgttccggcatcgtgcaggcgtaccgtaccggtcgtggctccgtc
tatgtgcgtgccaaggccgaagtggaggtggacgagaagaccagtcgcgagaccatcatc
gttcacgagatcccctatcaggtgaataaggcgcggctgatcgagaagatcgccgagctg
gtcaaagagaagaagatcgagggcatcagtgccctgcgcgatgagtccgacaaggacggc
atgcgcatcgttatcgagatcaagcgcggcgagtccggcgagattgtgctgaacaatctc
tacaagcacacccagatgcagaccacgttcggcatcaacatggtagcgctggacaacaac
cagcccaaggtgatgaacctcaaagagatcctggatgcgttcctgctgcaccgccgtgaa
gtggtgacccgccggaccgtattcgaactgcgcaaggcgcgggatcgggctcacatcctg
gaaggcctggcggtggcgctggccaacatcgacccggtcatcgagctcattcgccacagc
gcgaccccggccgacgcgaaagcgggcctggttgcccgcggctgggagctcggcaacgtg
gcctccatgctggagaaagccggtgacgacgcagcccgccccgagtggctggaacccgag
ttcggcatccgcgaaggtcactactacctgaccgagcagcaggcccaggccatccttgac
ctgcgtctgcacaagctgaccggcctcgagcacgagaagatcctggaagagtaccaatct
ctgctggatctcatcgccgagctgctgttcatcttggcgagcccggtgcgactgatggaa
gtgatccgtgacgaactgctggccgtgcgcgagcagtacggcgacgagcgtcgtaccgag
atcagcatgtccagtgccgagatcaacatcgaagatctgatcaccccggaagacgtggtc
gtgaccttgtctcaccagggttacgtgaagtatcagccgctctccgattacgaggcccag
cgccgcggtggtcgtggcaagtcggccacccggatcaaggaagaggactttgtggagcgt
ctgctggtggccaacacccacgacaccattctgtgcttctccacccgtggcaaggtctac
tggctcaaggtttaccagctgccggaggcgtcccgtggcgcccgcggtcgtccgatcatc
aacctgctgccgctggaagagggtgagcgtatcaccgccattctgccggtgaaggaatat
gacgccgagaagtatgtgttcttcgccaccgccaacggtaccgtgaagaagaccagcctg
tccgacttcagccgtccgctctcctccggcatccgcgccatcaacctcaaagagggtgat
gagctgatcggggtggatatcaccgatggcagcaacgagatcatgctgttctccgatgcg
ggcaaggtggttcgcttcgcggaaggcagtggtcgcgctgatgccgatgccactgacgaa
gtcgagaccgacgacgacgccggcaacgacgatgatggcagcgacaacggcgaaggcacc
gaaagcaagggtaccttcaagggcgtacgtcccatgggtcgtaccgctgcaggtgtgcgc
ggcatcaagctgggcgccggtgacaaggtggtgtccctcatcgtgccgcgtggcgacggg
gccatcctcaccgccaccgagaacggttatggcaagcgtaccgcgcttgacgagtacccg
accaagagccgtggtacccagggcgtcatctccatcaaggtggatgagcgcaacggcaag
gtgatcgatgcgatccaggtcgaagataccgaccagatcatgctgatcaccaacggcggt
actctggtacgtacccgggtgtccgaggtgagcgtcattggccgcaacaccggcggtgtg
cgtctgatccgtaccggtgaagacgagaccgtagtcggtctgcagcgggttgccgagagc
gacgaagacgaaaacgaagtgctggccgttgaaggggaggtgtctgaagacaccgatacc
gcagcggacaccggtgctgtcgatgcaggtgaagcgggcgacgaataa
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