Aeromonas hydrophila AL06-06: RY45_12755
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Entry
RY45_12755 CDS
T03748
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ahh
Aeromonas hydrophila AL06-06
Pathway
ahh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RY45_12755 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahh03400
]
RY45_12755 (xseA)
Enzymes [BR:
ahh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RY45_12755 (xseA)
DNA repair and recombination proteins [BR:
ahh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RY45_12755 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AJQ54903
LinkDB
All DBs
Position
2810171..2811535
Genome browser
AA seq
454 aa
AA seq
DB search
MNYRNEPSQSRQQQVFTVTRLNSAVRMILEQDLGLVWLTGELSNLAMPSSGHWYFSLKDM
SAQVRCAMFKGNNRRVAFRPQDGMQVLVQARVSLYEPRGDYQLIIESMQPAGDGVLALRF
EELKRRLGAEGLFDEGRKRPLPREPRAVGLITSATGAALHDMLTVLKRRAPDLPVFIYPT
QVQGSAAIGQIVSAIALANRRAEVDVLIVGRGGGSLEDLWCFNEEAVARAIASSAIPVVS
AVGHEVDVTISDFAADLRAPTPSAAAELVAPDQSARAQRLAHLKQQLLQAMNRQQTAARH
DFILLQKRLDHQDPKRRLEQQSQRLDELSARLQQLMNHRLHQGERRLANLELRLQGKSPE
RLLAAGKRRHQLAEERLHALIAKRRDLADHRLAMLSARLDGVSPLATLGRGYSITRTQSG
EVISRAAQVDAGQTLVTQLAEGQLRVRVEEVHQP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgaactaccgcaacgaaccgagtcaaagcagacaacagcaggtctttaccgtcacccgc
ctcaacagcgccgtgcgcatgatcctggagcaggatctggggctggtgtggctgaccggc
gagctctccaacctggcgatgccaagctccggccactggtacttctcgctcaaggacatg
tcggcccaggtgcgctgcgccatgttcaagggcaacaaccggcgggtcgcgtttcgcccg
caggatggcatgcaggtactggtgcaggcgcgggtctccctctatgagccgcgcggcgac
taccagctgatcatcgaatcgatgcagccggcgggcgacggcgtgctggcgctgcgcttt
gaggagctcaagcgccgcctcggtgccgaggggttgttcgacgaggggcgcaagcggccg
ctgccgcgtgaaccgcgcgcggtgggcctcatcacctccgccaccggcgctgccctgcac
gacatgctgacggtgctcaaacgccgcgcgccggatctgccggtgtttatctacccgact
caggtgcaggggagcgccgccatcggccagatcgtctctgccattgccctggccaaccgc
cgcgccgaggtggatgtgctgatcgtcgggcgcggcggcgggtcgctcgaagatctctgg
tgcttcaacgaagaggcggtggcacgcgccatcgccagctccgccatcccggtggtgagc
gcggtgggccacgaggtggatgtcaccatcagcgactttgccgccgacttgcgcgccccg
accccgtcggcagccgccgagctggtggcgccggatcagagcgcccgcgcccagcgcctc
gcccatctcaagcagcaactgctgcaggcgatgaaccgccagcagaccgccgcccgccac
gatttcatcctgctgcaaaagcggctcgatcatcaggatccgaagcggcggctggaacag
caatcccagcgcctcgacgagctctccgcccgtttgcagcagctgatgaatcacagattg
catcagggggagcggcgcctcgccaacctggagctgcgcctgcagggcaagagcccggag
cgcttgctggccgccggcaagcgtcgccaccagctggccgaggagcgcctccatgccctc
atcgccaaacgccgggatctggccgaccaccgcctcgccatgctcagcgcccgcctcgac
ggggtaagcccgctcgctaccctggggcgcggctactccatcacccgcacccagagcggt
gaagtgatcagccgcgccgcccaggtcgatgccggccagacgctggtcacccagcttgca
gaggggcaactgcgggtgcgggtggaagaggtccaccagccataa
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