Aeromonas hydrophila AL06-06: RY45_15715
Help
Entry
RY45_15715 CDS
T03748
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ahh
Aeromonas hydrophila AL06-06
Brite
KEGG Orthology (KO) [BR:
ahh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahh03400
]
RY45_15715
DNA repair and recombination proteins [BR:
ahh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RY45_15715
Archaeal homologous recombinant proteins
RY45_15715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
Jnk-SapK_ap_N
ABC_tran
ABC_ATPase
AAA_21
MMR_HSR1
MukB
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AJQ55460
LinkDB
All DBs
Position
complement(3495589..3499341)
Genome browser
AA seq
1250 aa
AA seq
DB search
MKILSLSGENLASLTGQFTIDFAGGALGAAGLFAITGNTGAGKSTLLDAICLALFDEMPR
FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRVWLARWAVRRAR
NRAEGRFQAQERSLTDVASGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSSADERSALLERMTGTELYSAISVQTHERAREEQQQLAAISQRLGDVALMDEATREQWV
SQQVSLATSLKHEQQQQQLMQDLRDLNGRIAAQLQACEEGEAALAAAEVAHGAAAPEREE
FARAEQAQVARADHDELARLTLEVQQQEKLLAELGPELGKLEEQTQQSALTEQQLLAEKI
AAEREWGALQPELKRAQELDTRIREKQQQLQKIQQEGTQEREVQLTLEQGWHQQRQQVEQ
LKAQHQQWGAWLEEHKELAPVARQWQPLLTAMQDWAEDAGRLQQLLTLREHKLRALRQLQ
HQLEQGQQERDYWQREQERLQQQQHELQEQQWEGRLAKAQEQWQQQTEQLGQLRQLLELA
DYGRNHGEQHGRLQQEIAQLEQALGKLAILGDELAPARERLALQRDEARHALERSRAIAS
FEQHRHMLSDGEPCPLCGAEEHPYRQSQPQVAGILGQLAERARSLELEWERLNHQYIQCE
SERQELARQLAVRQQHLPELETRAEQLTLRWQQLGGDTLLGHPLPLGQSPIEWNELMNTL
LGRGQSLEQGLAHSQQQLREAQQGQQQLQAVRQQLSQLASQHQQFEQQWQEADRQRIALE
GEVKAMSEQETTLRQRLEQGGNRLDEQMGGQPWRQWLGSQQWHEWQRACEAWLHGQSEWE
RLAGEIASLTPALSAQEARLQTQRELLHKLERDYKEHEQQRQGLVTSRATCLGGEEIAQV
EHRWQQRLQQLASELEMMQGAARALRERQTELKARLNHLEQEKQVSSRRRREVLGRWAAH
ASSLGIAEYDLRRLLAMSPDELKARRAALQALEDARAEARTRLTERQRALALEESKRDRY
REHHPELAALAPEELDSRLTALEAHCRALDEQLFQCKSTLAQAEAAALKAGTLQEELAAQ
QAVADHWQRLSDLIGSASGAKLRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA
LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS
LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQVRVEALGGGESRVVLP
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctctctttgagtggtgagaacctcgccagcctgaccggtcaattcaccatc
gactttgccggtggtgccctgggggccgccggcctgtttgccatcaccggcaataccggc
gccggcaaaagcaccctgctcgatgccatctgtctggcgctctttgatgagatgccgcgc
tttatcgccaatcgcaagaacgtggccgaagtgggccgcatggatgacgaggagaagctc
aaggccaacgacgtgcgcggcatcctcagccgcggtcacgccagcggttttgccgaggtg
cagtttcgcggctgcgacggccgtgtctggctggcccgctgggcggtgcgccgggcccgc
aaccgcgccgaggggcgctttcaggcccaggagcgcagcctgaccgacgtggcgtcgggc
caggtgttcagtggcagcaagcgggagctgcaggatcgcatcgacgagctggtggggctc
tcctgggagcagtttcgccgcgccgtcattctgccgcagggggagtttgccgccttcctc
aaatcgagcgccgacgagcgttcggccctgctcgaacggatgaccggcaccgagctctac
tccgccatttcggttcagacccatgaacgggcgcgggaggagcagcagcaactggccgcc
atcagccagcggctcggcgacgtggcgttgatggacgaggcgacccgcgagcagtgggtg
agccagcaggtcagcctcgccaccagcctcaaacacgagcaacaacaacagcaactgatg
caggacttgcgcgacctcaatggccgcatcgccgcccagttgcaggcctgtgaggagggg
gaggcggccttggccgccgcggaggtggcccacggtgcggccgcccccgagcgcgaggag
tttgcccgcgccgagcaggcccaggtggcccgcgccgatcacgacgagctggcccgcctc
accctggaggtgcagcagcaggagaaactgttggccgagcttggccccgaacttggcaag
ctggaggagcagacccagcagagcgccctcaccgagcagcagctgctggcagagaagatc
gccgccgagcgcgagtggggcgccctgcagcccgagctcaagcgggcgcaggagctcgat
acccgcattcgggaaaagcagcagcaactgcagaagatccagcaggagggaacgcaggag
cgggaggtgcagcttaccctggagcagggctggcaccagcagcgccagcaggtggagcag
ctcaaggcccagcaccagcagtggggcgcttggcttgaagagcacaaggagctggcgccg
gtggcccgccaatggcagcccctgctcaccgccatgcaggattgggccgaagatgccggc
aggctgcagcaactgctcaccctgcgtgagcacaagctgcgcgccctcaggcagttgcag
caccagctggagcaggggcagcaggagcgcgactactggcagcgcgagcaggagcggctg
cagcagcaacagcacgagctgcaggagcagcagtgggaggggcgcctggccaaggcgcag
gagcagtggcagcagcagaccgaacagctgggtcagctgcgccagttgctggagctggcc
gactatggccgcaatcacggcgagcagcatggtcgcctgcagcaggagattgcccagctg
gagcaggcgctcggcaagctggccatcctcggcgacgagctggcgccggcccgtgagcgg
cttgccctgcagcgggacgaggcacgccacgcgctggagcggtcccgcgccatcgccagt
ttcgagcagcatcgtcatatgctcagcgacggcgaaccctgcccgctgtgcggtgccgag
gagcatccctatcgccagagccagccgcaggtggcgggcattctgggccagctggcggag
cgtgcccgcagcctcgagctagagtgggagcggctcaatcaccaatacattcagtgcgag
agcgaacgccaggagctggcccgtcaactggcggtgcgccagcaacatctgccggagctg
gagacgcgcgccgagcagctgaccttgcgctggcaacaactgggaggcgataccctgctc
ggccatccgctgccgctaggtcagagcccgatcgagtggaatgaattgatgaataccctg
ctgggccgtggccagagcctggagcaggggctggcccacagccagcagcaactgcgtgag
gcccagcaggggcagcagcagttgcaggccgtgcgccagcagttgagccagctggccagc
cagcaccagcagttcgagcagcagtggcaggaggcagaccgccagcgcatcgccctggag
ggggaggtgaaggcgatgagcgagcaggagacgaccttgcgccagcgcctcgagcagggg
ggcaaccggctcgacgagcagatggggggccagccctggcgccagtggctcggcagccag
cagtggcacgagtggcagcgggcctgcgaggcctggctgcatggccagagcgagtgggag
cggttggccggcgagattgccagccttaccccggccctgagcgcccaggaggcgcgcctg
cagacccagcgcgagctgctgcacaagctcgagcgcgactacaaggagcatgaacagcaa
cggcaggggctggtcaccagccgcgccacctgtctggggggcgaggagatagcccaggtc
gagcatcgctggcagcagcggctgcagcagctggccagcgagctggagatgatgcagggg
gcggcccgcgccctgcgtgagcgccagaccgagctcaaggcccgtctcaaccatctggag
caggagaagcaggtgagcagccggcggcggcgggaggtgctggggcgctgggctgcccac
gccagcagcctcggcattgccgaatatgacctgcgccgcctgctggccatgagcccggat
gagctcaaggcgcgccgcgccgccttgcaggcgctggaggatgcccgcgccgaggcgcgt
acccgtttgaccgagcggcagcgggcgctggcgctggaggagagcaagcgggatcgttac
cgcgagcatcaccccgagctggcagcgctggcgccagaggagctagacagccggctgacg
gcgctggaggcgcactgccgtgccctcgacgagcagctgttccagtgcaagagcacgctg
gcccaggccgaggcggctgccctcaaggcaggcaccctgcaggaggagctggccgcccag
caggcggtggcggatcactggcagcgactctccgatctcatcggctcggccagcggtgcc
aagctgcgaaccttcgcccagagcctgaccctggagcggttgctgctggaggccaacgcc
cagcttgccgagctctccccccgctatcggctggagcgggtgcccggtaccgatcttgca
ctgcaggtggtggatctcgacatgggggacgaggtgcgctcggtggactccctctccggc
ggcgagagcttcctggtgtcgctggcgctggcgctggccctctccagcctgtcgtcgcgc
cagacccaggtcgaatcgctctttatcgacgagggcttcggcaccctggatcccgacagc
ctggatctggcgctctcaagcctcgattccctgcaggcggccggccgccagatcggggtc
atctcccacgtacagaccctggtggagcggatcggcgtacaggtgcgggtggaagccctc
ggcggaggcgaaagccgggtggtactgccctga
DBGET
integrated database retrieval system
