Aeromonas hydrophila AL06-06: RY45_16530
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Entry
RY45_16530 CDS
T03748
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K22051
miniconductance mechanosensitive channel
Organism
ahh
Aeromonas hydrophila AL06-06
Brite
KEGG Orthology (KO) [BR:
ahh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ahh02000
]
RY45_16530
Transporters [BR:
ahh02000
]
Other transporters
Pores ion channels [TC:
1
]
RY45_16530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Vip3A_N
Motif
Other DBs
NCBI-ProteinID:
AJQ55609
LinkDB
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Position
3684445..3687723
Genome browser
AA seq
1092 aa
AA seq
DB search
MLQRLLCLLLSLTLLTPLAQADDAITQVEELLQSVPKTDTPENQKLRESYQQALQFAREA
QRYREQGKAYQQILIDYPKESARLKESLHNYQPQPRPALSSLKEEALRQAIGLSSNRQLN
LRKERQGVMDSLNQLESTGQEYHLRVDELRKQLQQTRALLDRLSFSSESDRLQDAQQLVT
RLKEQSLSDRIQMLELEQLSAQQRNDLGKLRLQELNLAITDEDEWQTSLLNQQNQLRRDK
TEQALAESERLRKQLTSDMPLLLEQQQQNQALSIQLGALEDQIERVQDEQRVIDKNLSSL
NDLVNSVREQLEWLQISNAYGENLRSKLSDLPAYFPLDKLESAIVNARMAKYQYETEQDA
LKDPRQLRDQLLATDEVALDRAQQAVLDNLLKARRQLLTRLNDASDSLIQEQTRLKLLYS
RQNSKIDEIRELSASHLFWMPDVRPLTPAVLLGVPAALGLALNPVNWLQLPQAIAENNPI
TLTFAGIGILVLAWCWFKLARHLTHYSQHIAPRIGKVTQDKFSLTSRLLMRSLLASLPLP
AMVLMVRGLLDGAWQYPFAVAVARGLGEIWFLLLALLMARHLTLEKGILILHFRWQKERV
QKVWSQFRTLLLVIIPSFFVQGMANSYQEHAFYDSLGRLAFIVGALWLLLFFARLNRERL
PLTWGQADMTKPHLLHHFIWNSLMLAPLLAVIGSLLGYFYTSRILLRQLELSLLMGLGCL
LVYYLAHRWMLIQRRRLAFERAKSKRAEILAQRGREEGHDELSSEIPDVVEDTELDLDTI
SAQSLGLVRTLLMLGFTMLVVVQWSELNSAFSFLRSIEVWQVSSKIGGIEQLSAITLQDL
MLTVFTFILTVVTARNLPGLMELTLLQHLSLSPGTGFAITTVTKYIVLVVGALTGFSILG
IDWSKAQWMVAALSLGLGFGLQEIFANFVSGLIILFEKPIRLGDTVTIRELTGTVTKIKT
RATTIVDWDRKEIIVPNKAFITEQFINWSLSDAITRVRLRIRIGLTQEPRKIQTILEESI
RASTLVLETPSPEVFLIEFTDSALIYEIRLYVNSMDHRMPITHEVHSLVLEKLQQQGLGL
PHQQIDIRLSRA
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaacgcctgctctgcctgctgctctctctcactctcctcactccccttgcccag
gccgatgacgccatcacccaggtggaagagctgctgcagagcgtgcccaagaccgacacc
ccggaaaaccagaagttacgggaaagttaccagcaggcgctgcagtttgcccgggaggca
cagcgttatcgcgagcagggcaaggcctatcagcagatcctcatcgactatcccaaggag
tcggcccgcctcaaggagagcctgcacaactaccagccccagcctcgcccggccctctcc
tccctgaaggaggaggcgctgcgccaggccatcggcctgagcagcaaccgccagctcaac
ctgcgcaaggagcgccagggggtgatggacagcctcaaccagctggagagcaccggccag
gagtatcacctgcgggtcgacgagctgcgcaagcagttgcagcagacccgcgccctgctc
gaccggctcagcttcagcagcgaatcggatcgcctgcaggatgcccagcagctggtcacc
cgtctcaaggagcagagcctgtcggatcggatccagatgctggagctggagcagctctcc
gcccagcagcgcaacgatctcggcaagctcaggctgcaggagctcaacctcgccatcacc
gacgaggatgagtggcagaccagtctgctcaaccagcagaaccagctgcgccgcgacaag
accgagcaggcgctggcggagagcgagcggctgcgcaagcagctcacctccgacatgccg
ctgctgctggagcagcaacagcagaaccaggcactctccattcagctcggcgcgctggag
gatcagatagagcgggtgcaggatgagcagcgggtgatcgacaagaacctgtcgagcctg
aacgacctggtcaactcggtgcgcgagcaattggagtggctgcagatcagcaacgcctac
ggcgagaacctgcgcagcaaactctcggatctgcccgcctacttccccctcgacaagctg
gagtcggccatcgtcaacgcccgcatggccaagtaccagtacgagaccgaacaggacgca
ctcaaggatccgcgccagctgcgcgatcagctgctggccaccgacgaagtggccctcgat
cgcgcccagcaggcggtgctcgacaacctgctcaaggcccgtcgccagctattgacccgg
ctcaacgacgcctccgacagcctcattcaggagcagacccggctcaagctgctctatagc
cgccagaacagcaagatcgacgagatccgcgagctcagcgccagccacctgttctggatg
ccggacgtgcgcccgctcaccccggccgtgctgctcggggtgccggcggccctcggcctc
gccctcaacccggtcaactggctgcaactgccccaggccatcgccgagaacaaccccatc
accctcaccttcgccggcatcggcatcctggtgctggcctggtgctggttcaaactggct
cgccacctgactcactacagccagcacatagcgccccgcatcggcaaggtgacccaggac
aagttcagcctcaccagtcggctgctgatgcgctccctgctcgcctccctgccgctgccc
gccatggtgctgatggtgcgcggcctgctcgacggcgcctggcaatatccgttcgcggtg
gcggtggcccgcggccttggcgagatctggttcctgctgctggcactcttgatggcccgg
cacctgacgctggagaaggggatcctgatcctccattttcgctggcagaaggagcgggtg
cagaaggtgtggagccagtttcgcaccctgctgctggtgatcatcccgagcttcttcgtg
caaggcatggccaacagctatcaggagcacgccttctacgactccctcggccgactggcc
ttcatcgtcggcgccctctggctgctgctgttcttcgcccgcctcaaccgggagcggctg
ccgctcacctggggccaggccgatatgaccaagccacacctgctgcaccacttcatctgg
aacagcctgatgctggccccgctgctggcggtgatcggctctctgctcggctacttctac
acctcccgcatcctgctgcgccagctggagctgagcctgctgatggggctgggttgcctg
ctcgtctactatctggcgcaccgctggatgctgatccagcgtcgccgcctcgccttcgag
cgggccaagagcaaacgggccgagatcctggcccagcgcggccgggaagaggggcatgac
gaactcagctccgagatcccggacgtggtggaagacaccgagctggatctggataccatc
agcgcccagtcgctcgggctggtgcgcaccctgctgatgctgggcttcaccatgctggtg
gtagtgcagtggtccgaactcaactcggcgttcagctttctgcgcagcatcgaggtgtgg
caggtgagcagcaagattggcggcatcgagcagctctccgccatcaccttgcaggatctg
atgctgacggtgttcaccttcatcctgaccgtggtcaccgcccgcaacctgccgggcctg
atggagctgaccctgctccagcacctgagcctctcccccggcaccggctttgccatcacc
acggtgaccaagtacatagtgctggtggtgggggccctgaccggcttctccatcctcggc
atcgactggtccaaggcgcagtggatggtggcggccctctccctgggcctgggtttcgga
ctgcaggagatcttcgccaacttcgtgtcgggcctcatcatcctgttcgagaaaccgatc
cggctcggcgacaccgtcaccattcgcgagctgaccggcaccgtcaccaagatcaagacc
cgcgccaccaccatagtggattgggacaggaaggagatcatcgtccccaacaaggccttc
atcaccgaacagttcatcaactggtcgctgtcagacgccatcacccgggtgcggctgcgc
atccgcatcggcctgacccaggagcccagaaagatacagaccattctggaagagtcgatc
cgagcctccaccctggtgctggagaccccctcccccgaggtgttcctgatcgaattcacc
gactcggcgctgatctacgagatccggctctacgtgaacagcatggaccaccgcatgccc
atcacccacgaggttcactcgctggtgctggagaaattgcagcaacaggggctggggctg
ccgcaccagcagatcgacattcgtctgagccgggcctga
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