Aeromonas hydrophila AL06-06: RY45_20780
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Entry
RY45_20780 CDS
T03748
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ahh
Aeromonas hydrophila AL06-06
Pathway
ahh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RY45_20780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahh03400
]
RY45_20780
Enzymes [BR:
ahh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RY45_20780
DNA repair and recombination proteins [BR:
ahh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RY45_20780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJQ56376
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All DBs
Position
complement(4558921..4562271)
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AA seq
1116 aa
AA seq
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MFTLYHSNQLDLLKELLVSRIRQAPLSHPFEREQILVQSPGMAQWLKLELAKAFGIAANI
DFPLPASFIWEMFTQVLADVPRQSPYNKGAMSWQLMTILPALLDRPAFAPLAAYLGGEDA
DPARDPEQVRLWQLCQKVADLFDQYLVYRPDWIARWEQGEGLSQELAGVSGQDWQPELWR
ELVACTLAFSPSGYHRANLYEEFIHELARTATLPGKLPQRVFVFGISALPPRYVEALLAL
GSRPEVEVHLFVTNPCRYYWGDLLDRKTLARLENKLKPGTDIETLQGPANPLLASMGTLG
RDYLHQLMELEVPQIEAFVDIDELDGKGNIRLLHAIQKDVLELAERGASQFDLDASHHKS
PLDPADGSLQIHACHGPMRELEVLHDRLLALFEQDPTLTPKDVVVMMPDVNSYGPYIQAV
FGARGQIPFAVSDRAASQESPLLQSFLALLRLPNARFGAGELLAILEVPAVLRRFELDDE
EFNQLRVWVQETGIRWGLDDGYPERFELPRLSGNSWLFGLRRMLLGFAMGDGEPVAGILP
YADIEGQQGLALGKLAWFVDSLAEFLPRLQQAQPLGEWIACLNALLERFYLADEDEERQL
QLIRSQLADWLAQLGEARFEQPISADLLQDYLGSVLGESRSSQRFLAGQVNFCTLMPMRS
IPFKQVCLLGMNDGVYPRTLPPMGFDLMAVAGRRGDRSRRDDDRYLFLEALLSAQQGLYI
SYQGFSAQDNSDKVPSVLLAELIDYVRQGFVLAGDEKLDDERSGKRLLAHLITQHPLTPY
SHAYFYPAAGSGLFTYAADWLPALHPQRGAANFQSGELPLPPEWGKEQGLELAELLRFYR
QPARYFLNRRLKVWFELNEANIEESEPFELDGLQHYQLKDLLLDAHLAEGDSAMRRERLQ
LTGLLPQGWFGSLLLEDLDEQMGKLAERLRPWVAANEAEKQAVEVDIALAQGQLQGWIDT
QKGRLLVVKPGSFNGKDLLLGWIQHLCLSLSDAPGDTLLFDAKQSLRLARLPADEARPKL
AALVALWMQGMKRPLPFFPSTAWDWLKAIEKDPEKPEAADKAALTRFNGGYMAKGEGEDA
YVARCFPELDEAVLAQLQALAREHLTPLLKSLEELQ
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctctaccactccaatcagctggatttgctcaaagagctgctggtgagccgc
atccggcaggcgcccctctctcaccccttcgagcgcgagcaaattctggtgcagagtccg
ggcatggcccagtggctcaagctggagctggccaaggccttcggcattgccgccaatatc
gactttccgctgcccgccagctttatctgggagatgttcacccaggtgctggcggacgtg
cctcgccagagcccctacaacaagggcgccatgagctggcagctgatgaccattctgccc
gccctgctcgatcgcccggcctttgcgccactggccgcctatctgggcggggaggacgcg
gatcccgccagggatcccgagcaggtgcggctgtggcagctctgccagaaagtagcggat
ctcttcgaccagtatctggtctaccggccggactggatcgcccgctgggaacagggggag
gggttgagccaggagctggccggagtgagtggtcaggattggcaacccgaactgtggcgc
gagctggtggcctgcaccctggcgttctctccaagcggctaccaccgcgccaacctctac
gaggagttcatccacgagctggcgcgtaccgccacactgccgggcaagctgccgcagcgg
gtgtttgtgttcggcatctcggcattgccgccgcgctatgtggaggcgctgctggccctc
ggcagccggccggaggtggaggtgcacctgttcgtcaccaacccctgccgctactactgg
ggtgatctgctcgatcgcaagacgctggcgcgcctcgagaacaagctcaagcccggcacc
gacatcgagaccctgcagggccccgccaacccgctgcttgcctccatgggcacgctgggg
cgcgactacctgcatcagctgatggaattggaggtgcctcaaatagaggccttcgtcgat
atcgacgagctggatggcaagggcaatatcaggctgctgcacgccatccagaaggatgtg
ttggagctggccgaacggggcgccagccagttcgatctcgacgccagccaccacaagagc
ccgctcgatccggcggatggatccctgcagatccacgcctgtcatggcccgatgcgggaa
ctcgaggtgctgcacgaccggctgcttgcgctgttcgagcaggacccgaccctcaccccg
aaagatgtggtggtgatgatgccggacgtgaacagctacggcccctacattcaggcggtg
ttcggtgcgcgcggccagatcccgtttgcggtgtcggatcgggcagcgagccaggagagc
ccgctgctgcagagcttcctcgccctgctcaggttgcccaacgcccgcttcggggcgggc
gagctgctcgccattctcgaggtgcccgccgtgctgcgccgcttcgagctggatgacgag
gagttcaaccagctgcgggtctgggtgcaggagaccggcatccgctgggggctggatgac
ggctaccccgagcgcttcgagctgccgcgcctctctggcaacagctggctgttcggcctg
cgccgcatgctgctcggctttgccatgggtgacggcgaaccggtggccggcattttgcct
tacgccgatatcgaaggtcagcagggattggcgctcggcaagctcgcctggttcgtcgac
tcgctggccgaatttttgccccgcctgcaacaggcgcagccgctgggggagtggatcgcc
tgcctcaacgcgctgctggagcgcttctatctggccgacgaggatgaagagcgccagctg
caactgatccgcagccagctggccgactggctcgcccagctcggcgaagcccgcttcgag
cagcccatcagtgccgacctgttgcaggattacctcggcagcgtgctgggggagtcccgc
tccagccagcgcttcctcgccggtcaggtcaacttctgcaccctgatgccgatgcgctcc
atccccttcaagcaggtctgcctgctcggcatgaacgacggcgtctacccgcgcaccctg
ccgcccatggggtttgacctgatggcggtggcgggccggcggggggatcgctcccgtcgc
gacgacgaccgctacctgtttctcgaggcgctgctcagcgcccagcaggggctctacatc
agctatcagggtttcagcgcccaggacaacagcgacaaggtgccctcggtgttgctggcc
gagctcatcgactatgtgcggcagggcttcgtgctggcgggggatgagaagctcgatgac
gagcgctccggcaagcggctgctggcgcacctgatcacccagcatccgctcaccccctac
agccacgcctacttctatccggcggcaggttccggcctctttacctatgccgccgactgg
ctgccggccctccatccgcagcgcggcgcggccaactttcagagcggcgagctgccgctc
ccccccgaatggggcaaggagcaggggctggagctggcggagctgctgcgcttctatcgc
cagccagcccgctacttcctcaaccgccgcctcaaggtgtggttcgagctgaacgaagcc
aacatcgaggagagcgaaccgttcgagctggacggcctgcaacattatcagctgaaagat
ctgctgctcgatgctcacctggcagagggggacagtgccatgcgccgcgagcggctgcag
cttaccggcctgctgccgcaagggtggttcggcagcctgctgctggaggatctggacgag
cagatgggcaagctggcggagcggctgcggccctgggtggcggccaatgaggcggagaaa
caggcggtggaggtcgatatcgcgctggctcagggtcagctgcaagggtggatcgacacc
cagaaggggcgcttgctggtggtcaaacccggcagcttcaacggcaaggatctgctgctg
ggctggatccagcacctctgcctctccttgagcgacgcccccggcgacaccctgctgttc
gatgccaagcagagtctgcggctggccaggctcccggctgacgaggcgcggcccaagctg
gcggcgctggtggcgctctggatgcaggggatgaagcgaccgctgcccttcttcccgagc
accgcttgggactggctcaaggcgatcgagaaggatccggagaaaccggaggcggccgac
aaggcggccctcacccgcttcaacggcggctacatggccaagggggagggggaagacgcc
tatgtcgcccgctgtttcccggaactcgacgaggccgtgctggcccagttgcaggcgctg
gcccgtgaacacctgaccccgctgctcaagagcctggaggagttgcaataa
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