Aeromonas hydrophila AL06-06: RY45_21790
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Entry
RY45_21790 CDS
T03748
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ahh
Aeromonas hydrophila AL06-06
Pathway
ahh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RY45_21790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahh03400
]
RY45_21790
Enzymes [BR:
ahh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RY45_21790
DNA repair and recombination proteins [BR:
ahh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RY45_21790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
PriA-like_WH
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AJQ56782
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All DBs
Position
4785072..4787261
Genome browser
AA seq
729 aa
AA seq
DB search
MDLVRVAVPVPLRRHFDYLSPLPLPAPGCRVEIPFGPQTLVGLVVDHPADSQVPRNKLKP
IKRVLDSAPVLGPDILALMNWSASYYQHPLGEVLPHALPVLVRKGEPAAYRELEFWFATE
AGMAVDLNELKRAAKQQQALALLRKGPQTPSALKQEEIQSAALTALEKKGLLEKRSLEPS
HDGDWVARFEPGEGLRLNGEQALAVSAVTSQSDQFGAFLLDGITGSGKTEVYLSILEPLL
KAGKQALVMVPEIGLTPQTINRFRRRFNVPVVAMNSAMNDRERLDAWLACRDGGAAILIG
TRSAVFTPFHNLGIIIIDEEHDGSFKQQDGFRYHARDLAVMRAHRAGIPILLGSATPSLE
TLHNARSGKYHHLTLTRRAGNAQTARQVILDIKNVRLQAGLSPQLEQLMAEHLAAGNQVM
LFLNRRGYAPALICHQCGWSAACERCDAWYTWHQAGRRLHCHHCDSVRPLPHHCPECGSN
ELIGSGVGTEQLEQLLGTVFPQYPVVRIDRDNTRRKGELETHLGDIKAGKYKILIGTQML
AKGHHFPDVTLVGLLDVDGALFSADFRAAEKLAQLYTQVAGRAGRASKPGLVVLQSHHPE
HALLQDLTQNGYGHFADTALKERRLLGLPPFSYQGLFRAEANGRDEVQLFLSRLADTLRS
ARYPHVQVLGPISGFMERKAGKFRMQLLVQGPNRAPLAQLLDWAVKELEGWPETKRVRWS
LDIDPTELN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
ctggatctggttcgtgtggctgtgccggtgccgttgcgccgtcactttgactatctctcc
cccctgcctttgcctgcccccggctgccgggtcgagatcccgttcggcccgcaaaccctg
gtcgggctggtggtggatcacccggccgacagccaggtgccgcgcaacaagctcaagcct
atcaaacgcgtgcttgatagcgcccccgtgctggggcccgacattctggcgctgatgaac
tggagcgccagctactaccagcacccactgggggaggtactgccccacgccctgccggtg
ctggtgcgcaagggggagcccgctgcctaccgcgagctggagttctggttcgccaccgag
gccggcatggcggtcgatctcaacgagctcaagcgggcggccaagcagcagcaggcgctc
gccctgctgcgcaaggggccacagaccccctccgccctcaagcaggaggagatccagagt
gccgccctcaccgcgctggagaagaaggggctgctggagaagcgttcgctggagccgagc
catgacggcgactgggtcgcccgcttcgagccgggcgaggggctgcgcctcaatggcgag
caggcgctggcggtctccgccgtcaccagccagagcgaccagtttggcgccttcctgctg
gacggcatcaccggctccggcaagaccgaggtttacctgagcatcctcgagcccctgctc
aaggcaggcaagcaggcgctggtgatggtgcccgagatcggcctcactccgcagaccatc
aaccgcttccggcgccgcttcaacgtgccggtggtggcgatgaactcggccatgaacgat
cgggagcggctcgacgcctggctcgcctgccgcgacggcggtgccgccatcctgatcggc
acccgctccgcagtgttcaccccgtttcacaacctcggcatcatcattatcgacgaggag
cacgacggctccttcaagcagcaggacggctttcgctaccatgcgcgggatctggcggtg
atgcgggctcatcgcgccggcatccccatcctgcttggctcggccaccccgtcgctggaa
acattgcacaacgcccgcagcggcaagtaccaccacctcactctcactcgccgcgccggc
aatgcccagactgcccgccaggtgatcctggacatcaagaacgtgcggctgcaggccggg
ctctccccccagctggagcagctgatggcggaacatctggcggccggcaatcaggtgatg
ctgtttctcaaccgtcgtggctatgccccggccctgatctgtcaccagtgcggctggagc
gccgcctgcgagcgctgcgatgcctggtacacctggcaccaggccgggcggcggctgcac
tgccaccactgcgacagcgtgcgccctctgccccaccactgccccgagtgtggcagcaac
gaactaatcggatccggggtaggcaccgaacagctggagcagctgctcggcaccgttttc
ccgcaatatccggtggtgcgcatcgatcgggacaacacccgtcgcaagggagagctggag
acccacctcggcgacatcaaggcgggcaagtacaagatcctgatcggcacccagatgctg
gccaagggccaccacttcccggatgtgacgctggtcggactgctggatgtggatggcgcg
ctgttcagtgccgattttcgcgccgccgagaagctggcccagctctacacccaggtggcg
ggccgtgccggtcgcgccagcaagccggggctggtggtgttgcagagccaccatcccgaa
cacgccctgctgcaggatctgacccagaacggctatggccacttcgccgacacagcgctg
aaggagcgccgcctgctggggctgccaccgttcagctatcaggggctgttccgggccgag
gccaacggccgcgacgaggtgcagctgttcctcagccgtctcgccgataccctgcgcagc
gcccgctatccccatgttcaggtgctcgggcccatcagcggcttcatggagcgcaaggcg
ggcaagtttcgcatgcagttgctggtgcaggggccgaaccgggcaccactggcccaactg
ctggattgggcggtgaaggagctggaggggtggcccgagaccaagcgggtacgctggagc
ctcgacatcgaccccaccgagctgaactga
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