KEGG   Aeromonas hydrophila AH10: VU14_01780
Entry
VU14_01780        CDS       T03886                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
ahi  Aeromonas hydrophila AH10
Pathway
ahi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ahi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    VU14_01780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ahi03400]
    VU14_01780
Enzymes [BR:ahi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     VU14_01780
DNA repair and recombination proteins [BR:ahi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     VU14_01780
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_11
Other DBs
NCBI-ProteinID: AKA15695
LinkDB
Position
400026..403634
AA seq 1202 aa
MANPLNTLRFPLYGERLIEASAGTGKTYTIAGLYLRLLLGHGPLIEEGEDAGQPSAHERP
LSVTEILVVTFTEAATAELRGRIRARIHEARLAFMRGESKDALLSQLLAEVEEHELAARR
LLAAERQMDEAAVFTIHGFCQRMLKQNAFESGALFETEFLTDDSQLRLQAVSDYWRSEFY
PVDKPLASAVRALWPSPAALLREMGSWLDNSELEMRPPAGDETLAARHSVAMARIEAVKR
EWLAQGDEIRRQTDGQVSRYTGKNYEGWLAKIADWAQDEHSGYAIPKELERFGQTVLEEN
LKKGGAVPTLPLFSQIDELLASRPGIRDLILQRAAVVVRSRMQASKRQAHQLSFDDLLKD
LDGALGSGLGERLCERIRATYRVAMIDEFQDTDPQQYRIFHRLYGGHTDTALLMIGDPKQ
AIYGFRGADIFTYIQARRNVSAHYTLGRNWRSSRALVAAVNGLFERAKDPFIYEADIPFL
PVEAQGKSKALQLDGEAAPVLHCWQLTGQPTFNKGDYQSRMARATAVEIHRLLTLAREGK
AQIGDQPVKAGDIAVLVRTGAEGKLVQQELARLAIASVYLSNRESVLAQVEAREILLILH
ACQNPGEERSLRAALATGLFDLDAKALDELASDERAWESAVQEFMEYRKIWHKRGVLAML
RALLHRRNLASSLLASPNGERRLTNFLHLGELLQQVSCELDGEYALLRWLGEAASRPDGQ
DAEQVLRLESERKLVQIVTIHKSKGLEYPLVFLPFICSHRAADTPLFHEADGAGNRTVLD
LTGAEESLAEADRERLAEDLRLLYVALTRGVYATWLGLAPVRSGNGKSEQTDLHQTAIGY
LLQKGEEGDAATLATALTELAQALPGVAVGEPSLTRPAPLPPEEEQLGEPQVRHFTGTLE
RDWWISSYSGLAAQGHGHSKGVLANPGFDDEVVTEAAAALAAEQPDEAPQPSIFTFPKGA
RPGTLLHSLFETIDFQSAGGEPLAEHIATLLAQDGFDESWAPVLQQQVEAVLDTPLETGF
GEPVRLRDLAPERKQVELEFFLPMGRVTAPALTALCQQHDPLSRGNKPLSFATVQGMLKG
FIDLVFEWQGRWYLLDYKSNHLGMSPADYSRSVLEQAMAEHRYDLQYQLYSLALHRLLTL
RLPGYDFEQHFGGVFYLFLRGMPQGGIFHTRPSRELVLGLDRLFGEGAAPALAGVLDNEV
EA
NT seq 3609 nt   +upstreamnt  +downstreamnt
atggccaacccgctcaataccctgcgttttcccctttatggcgagcggctgatcgaggcc
tccgccggcaccggcaagacttacaccatcgccggtctctacctgcgtctgctgctgggc
catggcccgcttatcgaagagggggaagacgccggtcaacccagcgcccacgaacggccg
ctctcggtgaccgagatcctggtggtgacctttaccgaggcggccaccgccgagctgcgc
gggcggatccgcgcccgcatccacgaggcacgcctcgcctttatgcgcggtgagagcaag
gacgccctgctgagccagctgctggcggaggtggaggagcacgagctggcggcccgccgt
ctgctggccgccgagcggcagatggacgaggcggcggtcttcaccatccacggcttctgc
cagcggatgctgaaacagaacgccttcgagtcgggtgccctctttgaaaccgaatttctc
accgacgacagccagctcaggctgcaggcggtgagcgactactggcgatccgagttctat
ccggtggacaagcccctcgccagcgccgtacgtgcgctctggccgagccccgccgccctg
ctgcgggagatgggcagctggctcgacaacagcgagctggagatgcgcccgccggcgggg
gacgagaccctggcggcgcggcacagcgttgccatggcccgcattgaggcggtgaagcgc
gagtggctggcgcaaggggacgagatccgccgccagacggatgggcaagtaagccgctac
accggcaagaactacgaaggctggcttgccaagatagccgactgggcgcaggacgagcac
agcggctacgccattcccaaggagctggagcgcttcggccagacggtgctggaggagaac
ctcaagaaggggggcgcggtgccgaccctgccgctgttcagtcagatcgatgaactgctg
gcgagccgccccggtattcgggatctgatcctgcaacgggcggcggtggtggtgcgcagc
cggatgcaggccagcaagcggcaagctcatcagctttcgttcgatgacttgctgaaagat
ctcgacggcgcgcttggctccggccttggcgagcggctgtgcgagcgcattcgcgccacc
taccgggtggcgatgatcgatgaatttcaggataccgacccccagcagtaccgcatcttc
caccggctttacggcggccacacagacacggcgctcttgatgatcggtgaccccaagcag
gccatctacggctttcgcggcgccgacatctttacctacattcaggcgcggcgaaatgtg
agcgcccactacaccctcgggcgcaactggcgctccagccgcgccctggtggcggcggtc
aacggcctgttcgagcgggccaaggatccctttatctacgaggcggatatccccttcctg
ccggtggaggcgcagggcaagagcaaggcgctgcagctggatggcgaagccgcccccgtg
ctccactgctggcagctcaccggccagcccaccttcaacaagggggattaccagagccgg
atggcccgcgccacggcggtggagatccaccgcctgctgaccctggcccgggagggcaag
gcgcagattggcgatcagccggtgaaggccggagatatcgccgtgctggtgcgcaccggt
gccgagggcaagctggtgcagcaggagctggcgcggctcgccatcgcctccgtctatctg
tcgaatcgcgagagcgtgctggcgcaggtggaggcgcgggagattttgctcattctgcac
gcctgccagaacccgggggaggaacgcagccttagggcggcgctcgccaccgggctgttc
gatctggatgccaaggcgctcgacgaactcgccagtgacgagcgggcgtgggagagcgcg
gtgcaggagtttatggagtaccgcaagatctggcacaagcgcggcgtgctggccatgctg
cgcgccctgctgcaccggcgcaatcttgcctcctccctgctggcgagcccgaatggcgag
cggcggttgaccaacttcctccacctcggcgagctgctgcaacaggtgagctgtgagctg
gatggcgaatatgccctgctgcgctggctgggggaggcggcgagtcgccccgacggccag
gatgcggagcaggtactgcggctcgaatccgagcgcaagctggtgcagatcgtcaccatc
cacaaatccaaggggctggagtacccactggtgttcctgcccttcatctgcagccaccgc
gctgccgataccccgctgttccacgaagcggacggggcaggcaatcgcaccgtgctcgat
ctgaccggtgccgaggaatccctggccgaggccgaccgggagcgccttgccgaagacctg
cggctgctctacgtggcgctgacccggggcgtctacgccacctggctgggactggcaccg
gttcgctccggcaatggcaaatcggagcagaccgacctgcaccagaccgccatcggctac
ctgctgcagaagggcgaggagggggatgccgctaccctggcaaccgctctgaccgagttg
gcgcaggcgctgcccggggtggccgtcggtgagccctcgctcacccgcccggccccgttg
ccgccagaggaggagcagctgggcgagccgcaggtgcgccactttaccggcaccctcgag
cgggattggtggatcagctcctactccgggctggcggcgcagggtcatggccacagcaag
ggtgtcttggccaatcccggcttcgatgacgaggtagtcaccgaagcagccgctgcgctg
gcggcggaacaaccggacgaggcgccccagccctccatctttaccttcccgaaaggggcg
cgccccggcaccctgctgcacagcctgttcgagaccatcgattttcaaagcgccggcggc
gagccgctggcggagcacatcgccaccctgctggcgcaggatggcttcgacgaaagctgg
gcgcccgtgctgcaacagcaggtggaggcggtgctcgataccccgctggaaacgggcttt
ggcgagccggtgcggctgcgggatctggcccccgagcgcaagcaggtggagctggagttc
ttcctgcccatggggcgggtgacggcgccggcgctgaccgcgctctgccagcagcacgac
ccgctgtcgcggggcaacaagccgctcagctttgccaccgtgcaggggatgctcaagggc
tttatcgacctggtgttcgagtggcaggggcgctggtatctgctcgactacaaatcaaac
cacctcggcatgagcccggccgattacagccgctcagtgctggagcaggcgatggccgag
caccgctacgacctgcaataccagctctactcgctggcgctgcaccggctgctcaccctg
cgcctgcctggctacgacttcgagcagcactttggcggggtcttctatctgttcctgcgc
ggcatgccgcaggggggcattttccatacccgcccgagccgtgaactggtgctggggctg
gatcggttgtttggcgagggggcggcgcccgccctcgccggggtattggataacgaggta
gaagcatga

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