Aeromonas hydrophila AH10: VU14_01780
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Entry
VU14_01780 CDS
T03886
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ahi
Aeromonas hydrophila AH10
Pathway
ahi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VU14_01780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahi03400
]
VU14_01780
Enzymes [BR:
ahi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VU14_01780
DNA repair and recombination proteins [BR:
ahi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VU14_01780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AKA15695
LinkDB
All DBs
Position
400026..403634
Genome browser
AA seq
1202 aa
AA seq
DB search
MANPLNTLRFPLYGERLIEASAGTGKTYTIAGLYLRLLLGHGPLIEEGEDAGQPSAHERP
LSVTEILVVTFTEAATAELRGRIRARIHEARLAFMRGESKDALLSQLLAEVEEHELAARR
LLAAERQMDEAAVFTIHGFCQRMLKQNAFESGALFETEFLTDDSQLRLQAVSDYWRSEFY
PVDKPLASAVRALWPSPAALLREMGSWLDNSELEMRPPAGDETLAARHSVAMARIEAVKR
EWLAQGDEIRRQTDGQVSRYTGKNYEGWLAKIADWAQDEHSGYAIPKELERFGQTVLEEN
LKKGGAVPTLPLFSQIDELLASRPGIRDLILQRAAVVVRSRMQASKRQAHQLSFDDLLKD
LDGALGSGLGERLCERIRATYRVAMIDEFQDTDPQQYRIFHRLYGGHTDTALLMIGDPKQ
AIYGFRGADIFTYIQARRNVSAHYTLGRNWRSSRALVAAVNGLFERAKDPFIYEADIPFL
PVEAQGKSKALQLDGEAAPVLHCWQLTGQPTFNKGDYQSRMARATAVEIHRLLTLAREGK
AQIGDQPVKAGDIAVLVRTGAEGKLVQQELARLAIASVYLSNRESVLAQVEAREILLILH
ACQNPGEERSLRAALATGLFDLDAKALDELASDERAWESAVQEFMEYRKIWHKRGVLAML
RALLHRRNLASSLLASPNGERRLTNFLHLGELLQQVSCELDGEYALLRWLGEAASRPDGQ
DAEQVLRLESERKLVQIVTIHKSKGLEYPLVFLPFICSHRAADTPLFHEADGAGNRTVLD
LTGAEESLAEADRERLAEDLRLLYVALTRGVYATWLGLAPVRSGNGKSEQTDLHQTAIGY
LLQKGEEGDAATLATALTELAQALPGVAVGEPSLTRPAPLPPEEEQLGEPQVRHFTGTLE
RDWWISSYSGLAAQGHGHSKGVLANPGFDDEVVTEAAAALAAEQPDEAPQPSIFTFPKGA
RPGTLLHSLFETIDFQSAGGEPLAEHIATLLAQDGFDESWAPVLQQQVEAVLDTPLETGF
GEPVRLRDLAPERKQVELEFFLPMGRVTAPALTALCQQHDPLSRGNKPLSFATVQGMLKG
FIDLVFEWQGRWYLLDYKSNHLGMSPADYSRSVLEQAMAEHRYDLQYQLYSLALHRLLTL
RLPGYDFEQHFGGVFYLFLRGMPQGGIFHTRPSRELVLGLDRLFGEGAAPALAGVLDNEV
EA
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggccaacccgctcaataccctgcgttttcccctttatggcgagcggctgatcgaggcc
tccgccggcaccggcaagacttacaccatcgccggtctctacctgcgtctgctgctgggc
catggcccgcttatcgaagagggggaagacgccggtcaacccagcgcccacgaacggccg
ctctcggtgaccgagatcctggtggtgacctttaccgaggcggccaccgccgagctgcgc
gggcggatccgcgcccgcatccacgaggcacgcctcgcctttatgcgcggtgagagcaag
gacgccctgctgagccagctgctggcggaggtggaggagcacgagctggcggcccgccgt
ctgctggccgccgagcggcagatggacgaggcggcggtcttcaccatccacggcttctgc
cagcggatgctgaaacagaacgccttcgagtcgggtgccctctttgaaaccgaatttctc
accgacgacagccagctcaggctgcaggcggtgagcgactactggcgatccgagttctat
ccggtggacaagcccctcgccagcgccgtacgtgcgctctggccgagccccgccgccctg
ctgcgggagatgggcagctggctcgacaacagcgagctggagatgcgcccgccggcgggg
gacgagaccctggcggcgcggcacagcgttgccatggcccgcattgaggcggtgaagcgc
gagtggctggcgcaaggggacgagatccgccgccagacggatgggcaagtaagccgctac
accggcaagaactacgaaggctggcttgccaagatagccgactgggcgcaggacgagcac
agcggctacgccattcccaaggagctggagcgcttcggccagacggtgctggaggagaac
ctcaagaaggggggcgcggtgccgaccctgccgctgttcagtcagatcgatgaactgctg
gcgagccgccccggtattcgggatctgatcctgcaacgggcggcggtggtggtgcgcagc
cggatgcaggccagcaagcggcaagctcatcagctttcgttcgatgacttgctgaaagat
ctcgacggcgcgcttggctccggccttggcgagcggctgtgcgagcgcattcgcgccacc
taccgggtggcgatgatcgatgaatttcaggataccgacccccagcagtaccgcatcttc
caccggctttacggcggccacacagacacggcgctcttgatgatcggtgaccccaagcag
gccatctacggctttcgcggcgccgacatctttacctacattcaggcgcggcgaaatgtg
agcgcccactacaccctcgggcgcaactggcgctccagccgcgccctggtggcggcggtc
aacggcctgttcgagcgggccaaggatccctttatctacgaggcggatatccccttcctg
ccggtggaggcgcagggcaagagcaaggcgctgcagctggatggcgaagccgcccccgtg
ctccactgctggcagctcaccggccagcccaccttcaacaagggggattaccagagccgg
atggcccgcgccacggcggtggagatccaccgcctgctgaccctggcccgggagggcaag
gcgcagattggcgatcagccggtgaaggccggagatatcgccgtgctggtgcgcaccggt
gccgagggcaagctggtgcagcaggagctggcgcggctcgccatcgcctccgtctatctg
tcgaatcgcgagagcgtgctggcgcaggtggaggcgcgggagattttgctcattctgcac
gcctgccagaacccgggggaggaacgcagccttagggcggcgctcgccaccgggctgttc
gatctggatgccaaggcgctcgacgaactcgccagtgacgagcgggcgtgggagagcgcg
gtgcaggagtttatggagtaccgcaagatctggcacaagcgcggcgtgctggccatgctg
cgcgccctgctgcaccggcgcaatcttgcctcctccctgctggcgagcccgaatggcgag
cggcggttgaccaacttcctccacctcggcgagctgctgcaacaggtgagctgtgagctg
gatggcgaatatgccctgctgcgctggctgggggaggcggcgagtcgccccgacggccag
gatgcggagcaggtactgcggctcgaatccgagcgcaagctggtgcagatcgtcaccatc
cacaaatccaaggggctggagtacccactggtgttcctgcccttcatctgcagccaccgc
gctgccgataccccgctgttccacgaagcggacggggcaggcaatcgcaccgtgctcgat
ctgaccggtgccgaggaatccctggccgaggccgaccgggagcgccttgccgaagacctg
cggctgctctacgtggcgctgacccggggcgtctacgccacctggctgggactggcaccg
gttcgctccggcaatggcaaatcggagcagaccgacctgcaccagaccgccatcggctac
ctgctgcagaagggcgaggagggggatgccgctaccctggcaaccgctctgaccgagttg
gcgcaggcgctgcccggggtggccgtcggtgagccctcgctcacccgcccggccccgttg
ccgccagaggaggagcagctgggcgagccgcaggtgcgccactttaccggcaccctcgag
cgggattggtggatcagctcctactccgggctggcggcgcagggtcatggccacagcaag
ggtgtcttggccaatcccggcttcgatgacgaggtagtcaccgaagcagccgctgcgctg
gcggcggaacaaccggacgaggcgccccagccctccatctttaccttcccgaaaggggcg
cgccccggcaccctgctgcacagcctgttcgagaccatcgattttcaaagcgccggcggc
gagccgctggcggagcacatcgccaccctgctggcgcaggatggcttcgacgaaagctgg
gcgcccgtgctgcaacagcaggtggaggcggtgctcgataccccgctggaaacgggcttt
ggcgagccggtgcggctgcgggatctggcccccgagcgcaagcaggtggagctggagttc
ttcctgcccatggggcgggtgacggcgccggcgctgaccgcgctctgccagcagcacgac
ccgctgtcgcggggcaacaagccgctcagctttgccaccgtgcaggggatgctcaagggc
tttatcgacctggtgttcgagtggcaggggcgctggtatctgctcgactacaaatcaaac
cacctcggcatgagcccggccgattacagccgctcagtgctggagcaggcgatggccgag
caccgctacgacctgcaataccagctctactcgctggcgctgcaccggctgctcaccctg
cgcctgcctggctacgacttcgagcagcactttggcggggtcttctatctgttcctgcgc
ggcatgccgcaggggggcattttccatacccgcccgagccgtgaactggtgctggggctg
gatcggttgtttggcgagggggcggcgcccgccctcgccggggtattggataacgaggta
gaagcatga
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