Aeromonas hydrophila AH10: VU14_01785
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Entry
VU14_01785 CDS
T03886
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ahi
Aeromonas hydrophila AH10
Pathway
ahi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VU14_01785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahi03400
]
VU14_01785
Enzymes [BR:
ahi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VU14_01785
DNA repair and recombination proteins [BR:
ahi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VU14_01785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
Helicase_RecD
Viral_helicase1
SH3_13
UvrD-helicase
AAA_22
AAA_16
nSTAND3
CbiA
AAA_28
NTPase_1
SLFN-g3_helicase
SRP54
T2SSE
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AKA15696
LinkDB
All DBs
Position
403631..405694
Genome browser
AA seq
687 aa
AA seq
DB search
MSGTMISTAASTMMVERLKTLALAGRIRQLDLQFARLVADLGGSPELVLGAALTCFELGR
GHVCLPLEMLTDGSLRPFGLDPQQSRDLLGDLADPARWPALFAESPLVGTEQDEGLAPRW
PLRLWHGRLYLTRYHDFELGVARHLRALSERAEWPEIAPALSRLFARDYGLVFAALLKAR
LAPDFSARHFTLKYLDLVFPNEVDWPAIEGLLASAQAASDLSKLDALVPEALCCNGQKLA
AATAAARPFAVISGGPGTGKTTTVAKLLAILVETGLQAGKAPAIRLVAPTGKAAARLTES
IGSALQALDLPPEWVEAIPTEAGTLHRLLGVIPGRSQFRHHAGNPLHLDLLVVDEASMVD
LPMMARLLDALPSHAHLILLGDKDQLASVEAGAVLGDICSFIEQGISPAQADWLSRQTGY
RLQGTPAGAPVRDSLCLLAKSWRFDQHSGIGQLARACNSGDAMAVESVWGAGFADISLHP
WAGEAYDALIAQGVAGYGSYLKAARAGEDPAAVFKAFNSFQILCALRDGPFGVLGLNERL
ELALSRAGLIARDGDWYAGRPVMVVRNDHGVGLYNGDMGLCLPDESGRLKVWFEQPDGTL
RALLPSRLPPHETVYAMTIHKSQGSEFAHTVLVLPDSPSPLLTRELVYTGITRAKARLDL
YGDRALLAQAVRKKTERYSGLAERLGE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaccatgatcagcaccgcagccagcacaatgatggttgaacggttgaaaaca
ctggcgctggctggccgcatccgccagctggatctgcaatttgcccggttggtggcagac
cttggcggcagtcccgagctggtgctgggggcggcgctcacctgcttcgagctggggcgc
ggccatgtctgtctgccgcttgaaatgttgactgacggatccctgcgcccgttcgggctg
gatccccagcagagccgggatctgctgggggatctggcggatcctgcccgctggcccgcc
ctgtttgcagagagtcccctggttggtaccgaacaggatgaggggctcgccccgcgctgg
ccgctgcggctgtggcacgggcggctttatctcacccgctaccacgattttgaactgggg
gtggcccgccatctgcgcgccttgagtgaacgcgccgaatggccggagattgcaccggcc
ctgtcgcggctgtttgcccgcgactacgggctggtgttcgcggcgctgctaaaagcccgc
ctcgcccccgacttctcggcccgccactttaccctgaagtatctcgatctggtgttcccc
aatgaagtggattggcccgccatcgaagggttgctggccagtgcccaggcggcgagcgac
ttgagcaagctggatgcgctggtgcctgaggcgctctgctgcaacggccagaagctggcg
gcggccaccgcggcggcgcgcccctttgcggtgatctccggtggccccggcaccggcaag
accaccacggtggcgaaacttttggccattctggtggagaccggcctgcaggctggcaag
gcgccggcgatccggctggtggcccccaccggcaaggcggcggcgcgcctgaccgagagt
attggctctgccctgcaggccctcgatctgccccccgagtgggtggaagcgatccccacc
gaagcgggcaccttgcaccggctgctcggggtcattccggggcgcagccagttccgccac
cacgcgggcaacccgctgcacctcgacctgctggtggtggatgaggcctccatggttgac
ctgccgatgatggcgcgcctgctcgatgcgctgccgagccacgcccacctgatcctgctt
ggcgacaaggatcagctcgcctcggtggaggcgggggccgtgctcggcgatatctgcagc
tttatcgaacagggcatcagcccagcgcaggcggattggctctcccgccagaccggctac
cgcctgcaaggcacgcccgcgggggcaccggtgcgtgacagcctctgcctgctggccaag
agctggcgctttgatcagcactccggcatcggccagctggcacgcgcctgcaacagcggc
gatgccatggcggtggaatcagtctggggcgcaggattcgccgatatcagcctgcaccca
tgggccggggaggcctacgacgccctgattgcccagggggtagccggttacggcagctat
ctgaaggcggcccgcgcaggggaagatcccgccgcagtgttcaaggcattcaacagcttc
cagatcctctgcgccctgcgcgacggtccgttcggcgtgctggggcttaacgagcgcctc
gaactggccctgtcacgggcaggcctgattgcccgcgatggcgactggtatgccggccgc
ccggtaatggtggtgcgcaacgaccacggggtcggcctctacaacggcgatatggggctc
tgcctgcccgacgaaagcgggcggctcaaggtatggtttgagcagccggatggcaccctg
cgggccctgctgcccagccgcttgccgccccacgagaccgtctacgccatgaccatccac
aaatcccagggctcggagtttgcccataccgtgctggtgctgcccgacagccccagccca
ctgctgacccgcgagctggtctataccggcatcacccgcgccaaggcgcgcctcgatctc
tacggcgaccgagccctgctggcacaagcggtacgaaaaaagaccgagcgttattccgga
ttggcggagaggttaggggagtga
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