Aeromonas hydrophila AH10: VU14_01925
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Entry
VU14_01925 CDS
T03886
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ahi
Aeromonas hydrophila AH10
Pathway
ahi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ahi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VU14_01925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahi03400
]
VU14_01925
DNA repair and recombination proteins [BR:
ahi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VU14_01925
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VU14_01925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
AAA_25
AAA_23
AAA_21
DnaJ_CXXCXGXG
Viral_helicase1
nSTAND3
NACHT
cobW
BCA_ABC_TP_C
T2SSE
ScfRs
Motif
Other DBs
NCBI-ProteinID:
AKA15719
LinkDB
All DBs
Position
440180..443008
Genome browser
AA seq
942 aa
AA seq
DB search
MEKIVVRGARTHNLKNINLTLPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC
PTHAIPLAAQTISQMVDQVLAQPEGSKLMLLAPVVRDRKGEHTKLLENLAAQGYIRARID
GEVCDLSDPPALELHKKHTIEVVVDRFKVRDDLALRLAESFETALTLSGGIVLVVPMDGE
EGVAPMTFSANFACPECGYSMSELEPRIFSFNNPAGACPTCDGLGVQQYFDPAKVIGDPA
ISLANGAIRGWDKRSFYYFQMLKSLSEHYKFDLETPWEDLPLKTQEVILRGSGRTEIEFR
YMNDRGDVVVRKHPFEGILHNMERRYRETESNSVREELSKYIANKSCASCGGSRLREEAR
HVFVDNRNLPAIAEQSIGDALAFFEGLNLTGQRAQIAEKILKEIVERLGFLVNVGLNYLS
LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGN
TVIVVEHDEDAIRLADHVLDIGPGAGVHGGAIVAQGTPEEIINNPDSLTGDYLSGRKQIT
IPAERTPLTGKWLKLKGASGNNLRNVNLDLPIGVMTCVTGVSGSGKSTLINDTLFRIAHR
ELNKATESTPAPYRSVEGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELLSGTQE
ARSRGYQPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVKY
KGKNIHEILEMTVEDAREFFDPVPAVARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRDTGQTLYILDEPTTGLHFHDIQQLLKVLHQLRDRGNTIVIIEHNLDVIKTADW
IVDLGPEGGAGGGRILVTGTPEQMSRCEDSHTARFLAPLLAR
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatcgtggtccggggtgctcgcacccacaacctcaagaacatcaatctgacc
ctgccccgcgacaagctgatcgtggtcaccggcctctccggttcgggcaaatcctctctg
gcgttcgataccctctatgccgaggggcagcgccgctatgtggagtcgctctccgcctat
gcccgccagttcctctccctgatggagaagccggacgtcgaccatatcgaggggctctcg
ccagccatttccatcgagcagaagtccacttcccataacccgcgttcgaccgtcggcacc
atcaccgagatctacgactacctgcgtctgctgttcgcccgggtcggtgagccgcgctgc
ccgactcacgccattccgctcgccgcccagaccatcagccagatggtggatcaggtgctg
gcccagccggaggggagcaagctgatgctgctggccccggtggtgcgcgatcgcaagggt
gagcacaccaagctgctggagaatctggcggctcagggctacatccgtgcccgtatcgac
ggcgaggtgtgcgatctctccgacccgcccgcgctggagctgcacaagaagcacaccatc
gaggtagtggtggatcgcttcaaggtgcgcgacgacctggcactgcgtttggccgagtcg
ttcgaaacggcactgaccctctccggcggcatcgtactggtagtgccgatggacggtgaa
gagggtgttgcccccatgaccttctccgccaacttcgcctgcccggagtgcggctactct
atgtcggagctggagccacgcatcttctccttcaacaacccggccggtgcctgcccgact
tgtgatggtctgggtgtgcagcaatatttcgacccggccaaggtgatcggcgatccggcc
attagtctggccaacggtgccatccgtggctgggacaagcgcagcttctactacttccag
atgctcaaatccctctccgagcactacaagtttgatctggagacgccgtgggaggatctg
ccactgaagacccaggaggtgatcctgcgcggctccggtcgcaccgagatcgagtttcgc
tacatgaacgatcgcggcgacgtggtggtgcgcaagcacccgttcgaggggatcctacac
aacatggagcggcgctaccgggagaccgagtccaactcggtgcgcgaagagctctccaaa
tacatcgccaacaaatcctgtgccagctgcggtggcagccggctgcgggaagaggcgcgt
cacgtcttcgtcgacaaccgcaacctgcccgctatcgccgagcagtccatcggtgatgcg
ctcgccttctttgaggggctgaaccttaccggccagcgcgcccagatcgccgagaagatc
ttgaaagagatcgtcgagcggcttggcttcctggtgaacgtggggctcaactacctgagc
ctgtcgcgcagtgccgagaccctctccggcggcgaggcccagcggatccggctggccagc
cagatcggtgccggtctggtgggggtcatgtatgtgctggatgaaccttccatcggcctg
caccagcgcgacaatgagcggctgctcaagaccctcactcacctgcgtgatctcggcaat
accgtgatcgtggtggagcacgacgaggatgccattcgccttgccgaccatgtgctcgac
atcggtccgggggcgggagtgcacggcggtgccatcgtcgcccagggcacgccggaagag
atcatcaataatccagattcgctgaccggtgactacctctccggtcgcaaacagatcacc
attcccgccgaacggactccgctcaccggcaagtggctgaaactcaagggggcgagcggc
aacaacctgcgcaacgtcaacctggatctgcccatcggggtgatgacctgcgtcaccggc
gtctccggctccggcaagtcgaccctgatcaatgacaccctgttccgcatcgctcatcgc
gagctgaacaaggcgaccgaatccacgccggcgccctatcgcagcgtggaagggctggag
catctggacaaggtggtggatatcgaccagagccccatcggccgcaccccgcgctccaac
ccggccacctataccggcctgtttaccccgatccgcgagctgctctccggcacccaggag
gcgcgttcgcgcggctatcagccaggccgcttctccttcaacgtgaaagggggccgctgc
gaggcatgtcagggggatggcgtcatcaaggtggagatgcacttcctgccggatgtctac
gtgccgtgcgacgtctgcaagggcaagcgctacaaccgcgagacgcttgaagtgaagtac
aagggcaagaacatccacgaaatcctcgagatgacggtggaagatgctcgcgagttcttc
gatccggtgccggcggtggcgcgcaagctgcagaccttgatggacgtgggactctcctat
atccgcctcggccagtcggccactaccctgtcgggtggtgaggcgcagcgggtcaagctg
gcgcgcgagctctccaagcgggataccggtcagaccctctatattctggatgagccgact
accggcctgcacttccacgacatccagcagttgctcaaggtgctgcaccagctgcgggat
cgcggcaacaccatcgtcatcatcgagcacaatctggacgtcatcaaaactgccgactgg
atcgttgacctgggtccggaggggggcgccggtggtggccgcatcctggtgacggggacg
ccggagcagatgagccgttgcgaggattcccatacggcccgcttcctggcgccgctgctg
gcgcgataa
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