Aeromonas hydrophila AH10: VU14_04010
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Entry
VU14_04010 CDS
T03886
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ahi
Aeromonas hydrophila AH10
Pathway
ahi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VU14_04010 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahi03019
]
VU14_04010 (pcnB)
Enzymes [BR:
ahi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
VU14_04010 (pcnB)
Messenger RNA biogenesis [BR:
ahi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VU14_04010 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AKA16090
LinkDB
All DBs
Position
complement(846269..847768)
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AA seq
499 aa
AA seq
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MASRQFEVITRCTIFSQIANFCRKVLGKEDGEQSAESPIPARVAGQRRTLSRDQHPISRK
EISENALKVLYRLNKGGYEAYLVGGGVRDLLLGKTPKDFDIATDATPEQIKSLFSNCRLI
GRRFRLAHIVFGRDVIEVATFRGHHHQVNTSKHVSAQSDEGMLLRDNVYGTIEEDAERRD
FTVNALYYSAKDFTLHDFEGGLEDLAERKLELIGDPETRYREDPVRMLRAVRFAAKLDMT
ISPRTAAPIKELAPLLQDIPAARLFEETLKLFLAGDGLATYKLLREYGLFQQLFPQVAAL
FTPHGNSPYEQFIEQALIDTDTRVREDKRVTPAFLYATLLWGCVEARGRVLENESGLPWY
DAFMLAINEVLDNQVRIIAVPRRFTTDVRDIWALQQRLTRRQGRHPERAMEHPKFRAAFD
FLLLRNRVERGLGELASWWERYVESNPDVRPQLQREATRRPASGERGQAGEARSNDGEKR
SSNSRNRRRPRRRKPKAAE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
ttggcctcccgtcaatttgaagtcataacgaggtgtaccattttttcccagatcgcaaac
ttttgccgcaaagtgctcggcaaggaagacggcgagcagtcggcggagtcccccattccg
gcccgtgtcgccggacaacgtcgtaccttgagccgtgaccagcacccgatttcgcgcaaa
gagatcagcgagaatgcactcaaggtgctctatcgcctgaacaagggcggctacgaagcc
tacctggtcggcggcggagtccgggatctgctgctcgggaagacgcccaaggatttcgac
atcgctaccgatgcgacgccggagcagatcaagtcactgttcagcaactgccgcctgatc
ggccgccgtttccggctggcccacatcgtctttggtcgtgacgtgatcgaagtggccacc
ttccgcggtcaccaccatcaggtcaataccagcaaacatgtgtcggcccaatccgatgaa
ggcatgctgctgcgcgacaacgtctacggcaccatcgaagaggatgccgagcgccgcgac
tttaccgtcaacgccctctattacagtgccaaggatttcaccctgcacgatttcgagggc
gggctggaagacttggccgagcgcaagctggagctcattggcgatcccgagacccgctac
cgcgaagatccggtgcggatgctgcgcgccgtgcgcttcgccgccaagctggacatgacc
atcagcccgcgcaccgccgcccccatcaaggagctggcgccactgctgcaggatattccg
gcggcccgcctgttcgaggaaaccctcaagctgttcctggctggcgatggcctggccacc
tacaagctgctgcgcgaatacggcctgttccagcagctgttcccgcaggtggcggcgctg
tttaccccgcacggcaactcgccctacgagcagttcatcgagcaggcgctgatcgatacc
gacacccgggtacgggaagacaagcgcgtcacccccgccttcctctacgccaccctgctg
tggggctgtgtcgaggcccgcggccgggtgctggagaacgagagcggcctgccctggtat
gacgccttcatgctggcgatcaacgaggtgctggacaaccaggtgcggatcatcgccgtc
ccgcgccgtttcaccaccgatgtgcgcgacatctgggccctgcagcagcggctgacccgc
cgtcaaggccgccaccccgagcgggccatggaacatcccaagttccgcgcggcgtttgac
ttcctgttgctgcgcaaccgggtagagcgcggtctgggcgagctggccagctggtgggaa
cgctacgtggagtccaatccggacgtgcgcccgcagctgcaacgggaggcgacccgccgc
ccggcaagcggtgagcgcggtcaggccggtgaggcccgcagcaacgatggcgagaagcgc
agcagcaacagccgcaaccgtcgtcgcccccgtcgccgcaaaccgaaagcggccgagtga
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