Aeromonas hydrophila AH10: VU14_05165
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Entry
VU14_05165 CDS
T03886
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ahi
Aeromonas hydrophila AH10
Brite
KEGG Orthology (KO) [BR:
ahi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahi03016
]
VU14_05165 (truB)
Enzymes [BR:
ahi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VU14_05165 (truB)
Transfer RNA biogenesis [BR:
ahi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VU14_05165 (truB)
Prokaryotic type
VU14_05165 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AKA16289
UniProt:
A0A0F6K9L8
LinkDB
All DBs
Position
1094194..1095153
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AA seq
319 aa
AA seq
DB search
MSRRRRFKGRDVHGILLLDKPTGLTSNDVLQKVKRIYNAAKAGHTGALDPLATGMLPICL
GEATKFSQYLLEADKRYEVTAKLGERTNTSDSDGEVVSTRPVNVAVGTLIESLDQFRGPI
MQVPSMYSALKHNGRPLYEYAREGIEIEREARPITVFELKLISFEGDEVKLEVHCSKGTY
IRSLVDDLGEVLGCGAHVTQLRRTQVASYPYERMLTLEQLECIFEQAKAESIPPREQLDP
LLLPMDTAVASLPEVNMLAAVAAYVNQGQAVQVAGAPQSGQVRMTVGPEREFIGVGEIDD
EGRVAPKRLVRYHDEHDEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtagacgtcgtttcaagggccgtgacgtgcacggtatcctgctgctggacaag
ccgaccgggctgacctccaacgatgtgttgcagaaggtcaagcggatctacaacgccgcc
aaggccggccacaccggcgccctggacccgctggcaaccggcatgctgccgatctgcctc
ggcgaagccaccaagttctcccagtatctgctggaagcggacaagcgctacgaggtgacc
gccaagctgggcgaacgcaccaataccagcgactccgatggcgaggtggtctccacccgg
ccggtgaacgtggccgtgggtaccctgatcgagtcgctggaccagttccgcggccccatc
atgcaagtgccgtccatgtactccgccctcaagcacaacggtcgcccgctctacgagtac
gcccgtgaaggcatcgagatcgagcgggaagcccgccccatcacggtgttcgagctcaag
ctcatcagctttgaaggggacgaggtcaagctggaggtgcactgcagcaagggcacctac
atccgctccctggtggacgatctgggggaggtgctgggctgcggcgcgcacgtcacccag
ttgcgccgtacccaggtggccagctatccctatgagcggatgctgaccctggaacagctc
gagtgcatcttcgagcaggccaaggccgaaagcattccgccgcgcgagcagctggatccg
ctgctgctgccgatggacaccgccgtggcaagcctgcccgaggtgaacatgctggccgcc
gtggctgcctatgtgaaccagggccaggccgtgcaggtcgccggggcgccgcagagcggt
caggtgcgcatgacggtcggtccggagcgcgagttcatcggtgtgggcgagatcgacgac
gaggggcgcgtggcgcccaagcgtctggtgcgttatcacgacgaacacgacgaggagtga
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integrated database retrieval system
